Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3631 |
Symbol | rpsT |
ID | 6065941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3977144 |
End bp | 3977407 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641603048 |
Product | 30S ribosomal protein S20 |
Protein accession | YP_001726571 |
Protein GI | 170021617 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0268] Ribosomal protein S20 |
TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000506786 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.726814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAATA TCAAATCAGC TAAGAAGCGC GCCATTCAGT CTGAAAAGGC TCGTAAGCAC AACGCAAGCC GTCGCTCTAT GATGCGTACT TTCATCAAGA AAGTATACGC AGCTATCGAA GCTGGCGACA AAGCTGCTGC ACAGAAAGCA TTTAACGAAA TGCAACCGAT CGTGGACCGT CAGGCTGCTA AAGGTCTGAT CCACAAAAAC AAAGCTGCAC GTCATAAGGC TAACCTGACT GCACAGATCA ACAAACTGGC TTAA
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Protein sequence | MANIKSAKKR AIQSEKARKH NASRRSMMRT FIKKVYAAIE AGDKAAAQKA FNEMQPIVDR QAAKGLIHKN KAARHKANLT AQINKLA
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