Gene EcolC_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3624 
Symbol 
ID6065860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3969028 
End bp3969849 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content53% 
IMG OID641603042 
Productdihydrodipicolinate reductase 
Protein accessionYP_001726565 
Protein GI170021611 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.64425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGATG CAAACATCCG CGTTGCCATC GCGGGAGCCG GGGGGCGTAT GGGCCGCCAG 
TTGATTCAGG CGGCGCTGGC ATTAGAGGGC GTGCAGTTGG GCGCTGCGCT GGAGCGTGAA
GGATCTTCTT TACTGGGCAG CGACGCCGGT GAGCTGGCCG GAGCCGGGAA AACAGGCGTT
ACCGTGCAAA GCAGCCTCGA TGCGGTAAAA GATGATTTTG ATGTGTTTAT CGATTTTACC
CGTCCGGAAG GTACGCTGAA CCATCTCGCT TTTTGTCGCC AGCATGGCAA AGGGATGGTG
ATCGGCACTA CGGGGTTTGA CGAAGCCGGT AAACAAGCAA TTCGTGACGC CGCTGCCGAT
ATTGCGATTG TCTTTGCTGC CAATTTTAGC GTTGGCGTTA ACGTCATGCT TAAGCTGCTG
GAGAAAGCAG CCAAAGTGAT GGGTGACTAC ACCGATATCG AAATTATTGA AGCACATCAT
AGACATAAAG TTGATGCGCC GTCAGGCACC GCACTGGCAA TGGGAGAGGC GATCGCCCAC
GCCCTTGATA AAGATCTGAA AGATTGCGCG GTCTACAGTC GTGAAGGCCA CACCGGTGAA
CGTGTGCCTG GCACCATTGG TTTTGCCACC GTGCGTGCAG GTGACATCGT TGGTGAACAT
ACCGCGATGT TTGCCGATAT TGGCGAGCGT CTGGAGATCA CCCATAAGGC GTCCAGCCGT
ATGACATTTG CTAACGGCGC GGTAAGATCG GCTTTGTGGT TGAGTGGTAA GGAAAGCGGT
CTTTTTGATA TGCGAGATGT ACTTGATCTC AATAATTTGT AA
 
Protein sequence
MHDANIRVAI AGAGGRMGRQ LIQAALALEG VQLGAALERE GSSLLGSDAG ELAGAGKTGV 
TVQSSLDAVK DDFDVFIDFT RPEGTLNHLA FCRQHGKGMV IGTTGFDEAG KQAIRDAAAD
IAIVFAANFS VGVNVMLKLL EKAAKVMGDY TDIEIIEAHH RHKVDAPSGT ALAMGEAIAH
ALDKDLKDCA VYSREGHTGE RVPGTIGFAT VRAGDIVGEH TAMFADIGER LEITHKASSR
MTFANGAVRS ALWLSGKESG LFDMRDVLDL NNL