Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3623 |
Symbol | |
ID | 6066559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3967424 |
End bp | 3968572 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641603041 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001726564 |
Protein GI | 170021610 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.314254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATTAAGT CAGCGCTATT GGTTCTGGAA GACGGAACCC AGTTTCACGG TCGGGCCATA GGGGCAACAG GTTCGGCGGT TGGGGAAGTC GTTTTCAATA CTTCAATGAC CGGTTATCAA GAAATCCTCA CTGATCCTTC CTATTCTCGT CAAATCGTTA CTCTTACTTA TCCCCATATT GGCAATGTCG GCACCAATGA CGCCGATGAA GAATCTTCTC AGGTACATGC ACAAGGTCTG GTGATTCGCG ACCTGCCGCT GATTGCCAGC AACTTCCGTA ATACCGAAGA CCTCTCTTCT TACCTGAAAC GCCATAACAT CGTGGCGATT GCCGATATCG ATACCCGTAA GCTGACGCGT TTACTGCGCG AGAAAGGCGC ACAGAATGGC TGCATTATCG CGGGCGATAA CCCGGATGCG GCGCTGGCGT TAGAAAAAGC CCGCGCGTTC CCAGGTCTGA ATGGCATGGA TCTGGCAAAA GAAGTGACCA CCGCAGAAGC CTATAGCTGG ACACAAGGGA GCTGGACGTT GACCGGTGGC CTGCCAGAAG CGAAAAAAGA AGACGAGCTG CCGTTCCACG TCGTGGCTTA TGATTTTGGT GCCAAGCGCA ACATCCTGCG GATGCTGGTG GATAGAGGCT GTCGCCTGAC CATCGTTCCG GCGCAAACTT CTGCGGAAGA TGTGCTGAAA ATGAATCCAG ACGGCATCTT CCTCTCCAAC GGTCCTGGCG ACCCGGCCCC GTGCGATTAC GCCATTACCG CCATCCAGAA ATTCCTCGAA ACCGATATTC CGGTATTCGG CATCTGTCTC GGTCATCAGC TGCTGGCGCT GGCGAGCGGT GCGAAGACTG TCAAAATGAA ATTTGGTCAC CACGGCGGCA ACCATCCGGT TAAAGATGTG GAGAAAAACG TGGTAATGAT CACCGCCCAG AACCACGGTT TTGCGGTGGA CGAAGCAATA TTACCTGCAA ACCTGCGTGT CACGCATAAA TCCCTGTTCG ACGGTACGTT ACAGGGCATT CATCGCACCG ATAAACCGGC ATTCAGCTTC CAGGGGCACC CTGAAGCCAG CCCTGGTCCA CACGACGCCG CGCCGTTGTT CGACCACTTT ATCGAGTTAA TTGAGCAGTA CCGTAAAACC GCTAAGTAA
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Protein sequence | MIKSALLVLE DGTQFHGRAI GATGSAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI GNVGTNDADE ESSQVHAQGL VIRDLPLIAS NFRNTEDLSS YLKRHNIVAI ADIDTRKLTR LLREKGAQNG CIIAGDNPDA ALALEKARAF PGLNGMDLAK EVTTAEAYSW TQGSWTLTGG LPEAKKEDEL PFHVVAYDFG AKRNILRMLV DRGCRLTIVP AQTSAEDVLK MNPDGIFLSN GPGDPAPCDY AITAIQKFLE TDIPVFGICL GHQLLALASG AKTVKMKFGH HGGNHPVKDV EKNVVMITAQ NHGFAVDEAI LPANLRVTHK SLFDGTLQGI HRTDKPAFSF QGHPEASPGP HDAAPLFDHF IELIEQYRKT AK
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