| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3622 |
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| Symbol | carB |
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| ID | 6065897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3964185 |
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| End bp | 3967406 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641603040 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001726563 |
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| Protein GI | 170021609 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase
[COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.443028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAAAGTATC CTGATTCTGG GTGCGGGCCC GATTGTTATC
GGTCAGGCGT GTGAGTTTGA CTACTCTGGC GCGCAAGCGT GTAAAGCCCT GCGTGAAGAG
GGTTACCGCG TCATTCTGGT GAACTCCAAC CCGGCGACCA TCATGACCGA CCCGGAAATG
GCTGATGCAA CCTACATCGA GCCGATTCAC TGGGAAGTTG TACGCAAGAT TATTGAAAAA
GAGCGCCCGG ACGCGGTGCT GCCAACGATG GGCGGTCAGA CGGCGCTGAA CTGCGCGCTG
GAGCTGGAAC GTCAGGGCGT GTTGGAAGAG TTCGGTGTCA CCATGATTGG TGCCACTGCC
GATGCGATTG ATAAAGCAGA AGACCGCCGT CGTTTCGACG TAGCGATGAA GAAAATTGGT
CTGGAAACCG CGCGTTCCGG TATCGCACAC ACGATGGAAG AAGCGCTGGC GGTTGCCGCT
GACGTGGGCT TCCCGTGCAT TATTCGCCCA TCCTTTACCA TGGGCGGTAG CGGCGGCGGT
ATCGCTTATA ACCGTGAAGA GTTTGAAGAA ATTTGCGCCC GCGGTCTGGA TCTCTCTCCG
ACCAAAGAGT TGCTGATTGA TGAGTCGCTG ATCGGCTGGA AAGAGTACGA GATGGAAGTG
GTGCGTGATA AAAACGACAA CTGCATCATC GTCTGCTCTA TCGAAAACTT CGATGCGATG
GGCATCCACA CCGGTGACTC CATCACTGTC GCGCCAGCCC AAACGCTGAC CGACAAAGAA
TATCAAATCA TGCGTAACGC CTCGATGGCG GTGCTGCGTG AAATCGGCGT TGAAACCGGT
GGTTCCAACG TTCAGTTTGC GGTGAACCCG AAAAACGGTC GTCTGATTGT TATCGAAATG
AACCCACGCG TGTCCCGTTC TTCGGCGCTG GCGTCGAAAG CGACCGGTTT CCCGATTGCT
AAAGTGGCGG CGAAACTGGC GGTGGGTTAC ACCCTCGACG AACTGATGAA CGACATCACT
GGCGGACGTA CTCCGGCCTC CTTCGAGCCG TCCATCGACT ATGTGGTTAC TAAAATTCCT
CGCTTCAACT TCGAAAAATT CGCCGGTGCT AACGACCGTC TGACCACTCA GATGAAATCG
GTTGGCGAAG TGATGGCGAT TGGTCGCACG CAGCAGGAAT CCCTGCAAAA AGCGCTGCGC
GGCCTGGAAG TCGGTGCGAC TGGATTCGAC CCGAAAGTGA GCCTGGATGA CCCGGAAGCG
TTAACCAAAA TCCGTCGCGA ACTGAAAGAC GCAGGCGCAG ATCGTATCTG GTACATCGCC
GATGCGTTCC GTGCGGGCCT GTCTGTGGAC GGCGTCTTCA ACCTGACCAA TATTGACCGC
TGGTTCCTGG TACAGATTGA AGAACTGGTG CGTCTGGAAG AGAAAGTAGC GGAAGTGGGC
ATCACTGGCC TGAACGCTGA ATTCCTGCGC CAGCTGAAAC GCAAAGGCTT TGCCGATGCG
CGTCTGGCAA AACTGGCGGG CGTGCGCGAA GCGGAAATCC GCAAGCTGCG CGACCAGTAT
GACCTGCACC CGGTTTATAA GCGCGTGGAT ACCTGTGCGG CAGAGTTCGC CACCGACACC
GCTTACATGT ACTCCACTTA TGAAGAAGAG TGCGAAGCGA ATCCGTCTAC CGACCGTGAA
AAAATCATGG TTCTCGGCGG CGGCCCGAAC CGTATCGGTC AGGGTATCGA ATTCGACTAC
TGCTGTGTAC ACGCCTCGCT GGCGCTGCGC GAAGACGGTT ACGAAACCAT TATGGTTAAC
TGTAACCCGG AAACCGTCTC CACCGACTAC GACACTTCCG ACCGCCTCTA CTTCGAGCCG
GTAACCCTGG AAGATGTGCT GGAAATCGTG CGTATTGAGA AGCCGAAAGG CGTTATCGTT
CAGTACGGCG GTCAGACCCC GCTGAAACTG GCGCGTGCAC TGGAAGCCGC TGGCGTACCG
GTTATCGGCA CCAGCCCGGA TGCTATCGAC CGTGCGGAAG ACCGTGAACG CTTCCAGCAC
GCGGTTGACC GCCTGAAACT GAAGCAACCG GCGAACGCCA CCGTTACCGC TATCGAAATG
GCGGTAGAGA AGGCGAAAGA GATTGGCTAC CCGCTGGTGG TACGTCCGTC TTACGTTCTC
GGCGGTCGGG CGATGGAAAT CGTCTATGAC GAAGCAGACC TGCGTCGCTA CTTCCAGACG
GCGGTCAGCG TGTCTAACGA TGCGCCAGTG TTGCTGGACC ACTTCCTCGA TGACGCGGTA
GAAGTGGATG TGGACGCCAT CTGCGACGGC GAAATGGTGC TGATTGGCGG CATCATGGAG
CATATTGAGC AGGCGGGCGT GCACTCCGGT GACTCCGCAT GTTCGCTGCC AGCCTACACT
TTAAGTCAGG AAATTCAGGA TGTGATGCGC CAGCAGGTGC AGAAACTGGC CTTCGAATTG
CAGGTGCGCG GCCTGATGAA CGTGCAGTTT GCGGTGAAAA ACAACGAAGT CTACCTGATT
GAAGTTAACC CGCGTGCGGC GCGTACCGTT CCGTTCGTCT CCAAAGCCAC CGGCGTACCG
CTGGCAAAAG TGGCGGCGCG CGTGATGGCT GGCAAATCGC TGGCTGAGCA GGGCGTAACC
AAAGAAGTTA TCCCGCCGTA CTACTCGGTG AAAGAAGTGG TGCTGCCGTT CAATAAATTC
CCGGGCGTTG ACCCGCTGTT AGGGCCAGAA ATGCGCTCTA CCGGGGAAGT CATGGGCGTG
GGCCGCACCT TCGCTGAAGC GTTTGCCAAA GCGCAGCTGG GCAGCAACTC CACCATGAAG
AAACACGGTC GTGCGCTGCT TTCCGTGCGC GAAGGCGATA AAGAACGCGT GGTGGACCTG
GCGGCAAAAC TGCTGAAACA GGGCTTCGAG CTGGATGCGA CCCACGGCAC GGCGATTGTG
CTGGGCGAAG CAGGTATCAA CCCGCGTCTG GTAAACAAGG TGCATGAAGG CCGTCCGCAC
ATTCAGGACC GTATCAAGAA TGGCGAATAT ACCTACATCA TCAACACCAC CTCAGGCCGT
CGTGCGATTG AAGACTCCCG CGTGATTCGT CGCAGTGCGC TGCAATATAA AGTGCATTAC
GACACCACCC TGAACGGCGG CTTTGCCACC GCGATGGCGC TGAATGCCGA TGCGACTGAA
AAAGTAATTT CGGTGCAGGA AATGCACGCA CAGATCAAAT AA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIH WEVVRKIIEK ERPDAVLPTM GGQTALNCAL ELERQGVLEE FGVTMIGATA
DAIDKAEDRR RFDVAMKKIG LETARSGIAH TMEEALAVAA DVGFPCIIRP SFTMGGSGGG
IAYNREEFEE ICARGLDLSP TKELLIDESL IGWKEYEMEV VRDKNDNCII VCSIENFDAM
GIHTGDSITV APAQTLTDKE YQIMRNASMA VLREIGVETG GSNVQFAVNP KNGRLIVIEM
NPRVSRSSAL ASKATGFPIA KVAAKLAVGY TLDELMNDIT GGRTPASFEP SIDYVVTKIP
RFNFEKFAGA NDRLTTQMKS VGEVMAIGRT QQESLQKALR GLEVGATGFD PKVSLDDPEA
LTKIRRELKD AGADRIWYIA DAFRAGLSVD GVFNLTNIDR WFLVQIEELV RLEEKVAEVG
ITGLNAEFLR QLKRKGFADA RLAKLAGVRE AEIRKLRDQY DLHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSTDRE KIMVLGGGPN RIGQGIEFDY CCVHASLALR EDGYETIMVN
CNPETVSTDY DTSDRLYFEP VTLEDVLEIV RIEKPKGVIV QYGGQTPLKL ARALEAAGVP
VIGTSPDAID RAEDRERFQH AVDRLKLKQP ANATVTAIEM AVEKAKEIGY PLVVRPSYVL
GGRAMEIVYD EADLRRYFQT AVSVSNDAPV LLDHFLDDAV EVDVDAICDG EMVLIGGIME
HIEQAGVHSG DSACSLPAYT LSQEIQDVMR QQVQKLAFEL QVRGLMNVQF AVKNNEVYLI
EVNPRAARTV PFVSKATGVP LAKVAARVMA GKSLAEQGVT KEVIPPYYSV KEVVLPFNKF
PGVDPLLGPE MRSTGEVMGV GRTFAEAFAK AQLGSNSTMK KHGRALLSVR EGDKERVVDL
AAKLLKQGFE LDATHGTAIV LGEAGINPRL VNKVHEGRPH IQDRIKNGEY TYIINTTSGR
RAIEDSRVIR RSALQYKVHY DTTLNGGFAT AMALNADATE KVISVQEMHA QIK
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