Gene EcolC_3617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3617 
Symbol 
ID6065959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3959076 
End bp3960293 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content53% 
IMG OID641603035 
Productcrotonobetainyl-CoA:carnitine CoA-transferase 
Protein accessionYP_001726558 
Protein GI170021604 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0704222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC TACCCATGCC GAAATTCGGG CCGTTGGCCG GATTGCGCGT TGTCTTCTCC 
GGTATCGAAA TCGCCGGACC GTTTGCCGGG CAAATGTTCG CAGAATGGGG CGCGGAAGTT
ATCTGGATCG AGAACGTCGC CTGGGCCGAC ACCATTCGCG TTCAACCGAA CTACCCGCAA
CTCTCCCGCC GCAATTTGCA CGCGCTGTCG TTAAATATTT TCAAAGATGA AGGCCGCGAA
GCGTTTCTGA AATTAATGGA AACCACCGAT ATCTTCATCG AAGCCAGTAA AGGTCCGGCC
TTTGCCCGTC GTGGCATTAC CGATGAAGTA CTGTGGCAGC ACAACCCGAA ACTGGTTATC
GCTCACCTGT CCGGTTTTGG TCAGTACGGC ACCGAGGAGT ACACCAATCT TCCGGCCTAT
AACACTATCG CCCAGGCCTT TAGTGGTTAC CTGATTCAGA ACGGTGATGT TGACCAGCCA
ATGCCTGCCT TCCCGTATAC CGCCGATTAC TTTTCTGGCC TGACCGCCAC CACGGCGGCG
CTGGCAGCAC TGCATAAAGT GCGTGAAACC GGTAAAGGCG AAAGTATCGA CATCGCCATG
TATGAAGTGA TGCTGCGTAT GGGCCAGTAC TTCATGATGG ATTACTTCAA CGGCGGCGAA
ATGTGCCCGC GCATGAGCAA AGGTAAAGAT CCCTACTACG CCGGTTGCGG TCTGTATAAA
TGTGCCGACG GCTACATCGT GATGGAACTG GTGGGCATTA CCCAAATTGA AGAGTGCTTT
AAAGATATTG GCCTCGCACA TCTGCTTGGC ACGCCAGAAA TCCCGGAAGG CACTCAGCTT
ATCCACCGTA TCGAATGCCC TTACGGCCCA CTGGTTGAAG AGAAACTCGA TGCCTGGCTG
GCGACACATA CCATCGCGGA AGTAAAAGAA CGCTTTGCTG AACTGAATAT CGCCTGCGCC
AAAGTGCTGA CCGTACCGGA ACTGGAAAGC AATCCACAGT ATGTGGCTCG CGAATCAATC
ACTCAGTGGC AAACGATGGA TGGTCGCACC TGCAAAGGGC CGAACATCAT GCCGAAATTC
AAAAATAACC CCGGACAAAT CTGGCGCGGA ATGCCCTCAC ATGGCATGGA CACGGCTGCC
ATTTTGAAAA ATATCGGCTA CAGCGAAAAC GACATTCAGG AGTTGGTCAG CAAAGGTCTG
GCCAAAGTTG AGGACTAA
 
Protein sequence
MDHLPMPKFG PLAGLRVVFS GIEIAGPFAG QMFAEWGAEV IWIENVAWAD TIRVQPNYPQ 
LSRRNLHALS LNIFKDEGRE AFLKLMETTD IFIEASKGPA FARRGITDEV LWQHNPKLVI
AHLSGFGQYG TEEYTNLPAY NTIAQAFSGY LIQNGDVDQP MPAFPYTADY FSGLTATTAA
LAALHKVRET GKGESIDIAM YEVMLRMGQY FMMDYFNGGE MCPRMSKGKD PYYAGCGLYK
CADGYIVMEL VGITQIEECF KDIGLAHLLG TPEIPEGTQL IHRIECPYGP LVEEKLDAWL
ATHTIAEVKE RFAELNIACA KVLTVPELES NPQYVARESI TQWQTMDGRT CKGPNIMPKF
KNNPGQIWRG MPSHGMDTAA ILKNIGYSEN DIQELVSKGL AKVED