Gene EcolC_3610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3610 
Symbol 
ID6067519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3951052 
End bp3952383 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content53% 
IMG OID641603028 
Productmajor facilitator transporter 
Protein accessionYP_001726551 
Protein GI170021597 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0100231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCGT CCAGAAACTT TGACGATCTC AAATTCTCCT CTATTCACCG CCGCATTTTG 
CTGTGGGGAA GCGGTGGTCC GTTTCTGGAT GGTTATGTAC TGGTAATGAT TGGCGTGGCG
CTGGAGCAAC TGACGCCGGC GCTGAAACTG GACGCTGACT GGATTGGCTT GCTGGGCGCG
GGAACGCTCG CCGGGCTGTT CGTTGGCACA TCGCTGTTTG GTTATATTTC CGATAAAGTC
GGACGGCGCA AAATGTTCCT CATTGATATC ATCGCCATCG GCGTGATATC GGTGGCGACG
ATGTTTGTTT CATCCCCCGT CGAACTGTTG GTGATGCGGG TACTTATCGG CATTGTCATC
GGTGCAGATT ATCCCATCGC CACCTCAATG ATCACCGAGT TCTCCAGTAC CCGTCAGCGG
GCGTTTTCCA TCAGCTTTAT TGCCGCGATG TGGTATGTCG GCGCGACCTG TGCCGATCTG
GTCGGCTACT GGCTTTATGA TGTGGAAGGC GGCTGGCGCT GGATGCTGGG TAGCGCGGCG
ATCCCCTGTT TGTTGATTTT GATTGGTCGA TTCGAACTGC CTGAATCTCC CCGCTGGTTA
TTACGCAAAG GGCGAGTAAA AGAGTGCGAA GAGATGATGA TCAAACTGTT TGGCGAACCG
GTGGCTTTCG ATGAAGAGCA GCCGCAGCAA ACCCGTTTTC GCGATCTGTT TAATCGCCGC
CATTTTCCTT TTGTTCTGTT TGTTGCCGCC ATCTGGACCT GCCAGGTGAT CCCAATGTTC
GCCATTTACA CCTTTGGCCC GCAAATCGTT GGTTTGTTGG GATTGGGGGT TGGCAAAAAC
GCGGCACTAG GGAATGTGGT GATTAGCCTG TTCTTTATGC TCGGCTGTAT TCCGCCGATG
CTGTGGTTAA ACACTGCCGG ACGGCGTCCA TTGTTGATTG GCAGCTTTGC CATGATGACG
CTGGCGCTGG CGGTTTTGGG GCTAATCCCG GATATGGGGA TCTGGCTGGT AGTGATGGCC
TTTGCGGTGT ATGCCTTTTT CTCTGGCGGG CCGGGTAATT TGCAGTGGCT CTATCCTAAT
GAACTCTTCC CGACAGATAT CCGCGCCTCT GCCGTGGGCG TGATTATGTC CTTAAGTCGT
ATTGGCACCA TTGTTTCGAC CTGGGCACTA CCGATCTTTA TCAATAATTA CGGTATCAGT
AACACGATGC TAATGGGGGC GGGTATCTCG CTGTTTGGCT TGTTGATTTC CGTAGCGTTT
GCCCCGGAGA CTCGAGGGAT GTCACTGGCG CAGACCAGCA ATATGACGAT CCGCGGGCAG
AGAATGGGGT AA
 
Protein sequence
MQPSRNFDDL KFSSIHRRIL LWGSGGPFLD GYVLVMIGVA LEQLTPALKL DADWIGLLGA 
GTLAGLFVGT SLFGYISDKV GRRKMFLIDI IAIGVISVAT MFVSSPVELL VMRVLIGIVI
GADYPIATSM ITEFSSTRQR AFSISFIAAM WYVGATCADL VGYWLYDVEG GWRWMLGSAA
IPCLLILIGR FELPESPRWL LRKGRVKECE EMMIKLFGEP VAFDEEQPQQ TRFRDLFNRR
HFPFVLFVAA IWTCQVIPMF AIYTFGPQIV GLLGLGVGKN AALGNVVISL FFMLGCIPPM
LWLNTAGRRP LLIGSFAMMT LALAVLGLIP DMGIWLVVMA FAVYAFFSGG PGNLQWLYPN
ELFPTDIRAS AVGVIMSLSR IGTIVSTWAL PIFINNYGIS NTMLMGAGIS LFGLLISVAF
APETRGMSLA QTSNMTIRGQ RMG