| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3590 |
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| Symbol | thiP |
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| ID | 6067549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3925060 |
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| End bp | 3926670 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641603008 |
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| Product | thiamine transporter membrane protein |
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| Protein accession | YP_001726531 |
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| Protein GI | 170021577 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1178] ABC-type Fe3+ transport system, permease component |
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| TIGRFAM ID | [TIGR01253] thiamine ABC transporter, permease protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.838581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000463415 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACGC GCCGTCAGCC GTTAATTCCC GGCTGGTTAA TTCCAGGTGT AAGCGCCGCC
ACGCTGGTGG TAGCGGTTGC GCTCGCGGCG TTTCTCGCCC TGTGGTGGAA CGCGCCGCAG
GGTAACTGGG TGGCAATCTG GCAGGACAGC TACCTGTGGC ATGTGGTGCG CTTCTCCTTC
TGGCAGGCGT TTCTCTCGGC GCTGCTCTCT GTCGTACCCG CGATATTCCT CGCCCGCGCA
CTCTATCGCA GGCGCTTTCC GGGTCGGCTG GCGCTGTTGC GTCTGTGCGC AATGACCTTG
ATCCTCCCGG TGCTGGTTGC TGTTTTCGGC ATTCTTAGCG TCTATGGTCG TCAGGGCTGG
CTGGCATCGC TCTGCCAATC GCTCGGTCTG GAGTGGACCT TTTCGCCCTA CGGCCTGCAA
GGTATTTTGC TGGCGCACGT ATTTTTTAAT CTACCGATGG CGAGCCGCTT ATTACTCCAG
GCACTGGAAA ACATTCCCGG CGAGCAACGT CAGCTTGCCG CCCAGCTTGG GATGCGCGGC
TGGCATTTTT TCCGCTTCAT CGAATGGCCG TGGCTACGGC GACAAATCCC GCCGGTTGCC
GCGCTTATCT TTATGCTCTG TTTCGCCAGC TTCGCCACCG TGCTGTCGCT GGGCGGCGGT
CCGCAGGCAA CCACTATCGA GCTGGCAATC TATCAGGCGC TGAGTTACGA CTACGATCCT
GCCCGCGCGG CGATGCTGGC GCTGATCCAG ATGGTGTGTT GCCTCGGGTT GGTGCTGCTG
AGTCAGCGAT TGAGTAAGGC CATTGCGCCA GGCACCACGC TGCTGCAAGG CTGGCGCGAC
CCGGACGATC GTCTGCATAG CCGCATTTGC GACACGGTGT TAATTGTGCT GGCGCTGCTG
CTGTTGCTGC CACCGTTGCT GGCGGTGATC GTCGATGGGC TAAATCGCCA GTTGCCGGAA
GTGCTGGCAC AACCGGTGCT GTGGCAGGCG CTGTGGACCT CGTTGCGTAT TGCGCTGGCG
GCAGGTGTAT TGTGCGTAGT GCTGACCATG ATGCTGCTAT GGAGCAGTCG CGAACTTCGG
GCGCGGCAGA AAATGCTGGC GGGTCAGGCG CTGGAGATGA GCGGCATGTT GATTCTCGCC
ATGCCGGGGA TTGTGCTGGC TACCGGCTTC TTTTTACTGC TCAACAACAC CATTGGCCTG
CCGCAATCTG CTGACGGCAT TGTGATTTTC ACCAATGCGT TAATGGCGAT CCCTTATGCG
CTGAAAGTAC TGGAAAACCC GATGCGCGAT ATCACCGCCC GCTACAGTAT GTTGTGTCAG
TCGCTGGGCA TTGAAGGCTG GTCGCGCTTA AAAGTGGTCG AGCTGCGCGC CCTGAAACGT
CCACTGGCGC AGGCGCTGGC TTTTGCCTGC GTGCTGTCGA TTGGTGATTT TGGCGTAGTG
GCGTTGTTCG GTAACGATGA TTTCCGTACC CTGCCGTTTT ATCTCTACCA GCAAATTGGC
TCCTATCGCA GCCAGGACGG TGCGGTCACC GCGTTAATTC TGCTACTACT CTGTTTTCTG
CTGTTTACCG TGATTGAAAA ACTACCGGGG CGAAATGTTA AAACTGACTG A
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| Protein sequence | MATRRQPLIP GWLIPGVSAA TLVVAVALAA FLALWWNAPQ GNWVAIWQDS YLWHVVRFSF
WQAFLSALLS VVPAIFLARA LYRRRFPGRL ALLRLCAMTL ILPVLVAVFG ILSVYGRQGW
LASLCQSLGL EWTFSPYGLQ GILLAHVFFN LPMASRLLLQ ALENIPGEQR QLAAQLGMRG
WHFFRFIEWP WLRRQIPPVA ALIFMLCFAS FATVLSLGGG PQATTIELAI YQALSYDYDP
ARAAMLALIQ MVCCLGLVLL SQRLSKAIAP GTTLLQGWRD PDDRLHSRIC DTVLIVLALL
LLLPPLLAVI VDGLNRQLPE VLAQPVLWQA LWTSLRIALA AGVLCVVLTM MLLWSSRELR
ARQKMLAGQA LEMSGMLILA MPGIVLATGF FLLLNNTIGL PQSADGIVIF TNALMAIPYA
LKVLENPMRD ITARYSMLCQ SLGIEGWSRL KVVELRALKR PLAQALAFAC VLSIGDFGVV
ALFGNDDFRT LPFYLYQQIG SYRSQDGAVT ALILLLLCFL LFTVIEKLPG RNVKTD
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