| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3589 |
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| Symbol | tbpA |
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| ID | 6066442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3924101 |
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| End bp | 3925084 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641603007 |
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| Product | thiamine transporter substrate binding subunit |
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| Protein accession | YP_001726530 |
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| Protein GI | 170021576 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4143] ABC-type thiamine transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily
[TIGR01276] thiamine ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000386995 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAAAAA AATGTCTGCC CCTGCTGTTG CTGTGCACAG CGCCCGTTTT CGCTAAACCC
GTTCTGACTG TTTATACCTA CGATTCCTTC GCCGCCGACT GGGGGCCTGG TCCGGTGGTT
AAAAAAGCCT TTGAAGCCGA CTGTAATTGC GAACTGAAAC TGGTGGCGCT GGAAGATGGC
GTTTCGCTTC TCAACCGTCT ACGGATGGAA GGCAAAAACA GCAAAGCCGA TGTAGTTCTG
GGGCTGGATA ACAACCTGTT AGACGCCGCC AGTAAAACCG GACTGTTTGC CAAAAGCGGC
GTGGCAGCGG ATGCCATTAA CGTTCCCGGC GGCTGGAATA ATGACACTTT CGTACCGTTT
GATTACGGCT ACTTCGCCTT CGTCTACGAC AAGAACAAAC TGAAAAACCC GCCCCAAAGC
CTGAAAGAGC TGGTTGAGAG CGATCAAAAC TGGCGAGTGA TTTATCAGGA TCCGCGCACC
AGTACGCCGG GGCTGGGTCT GCTGTTGTGG ATGCAAAAAG TCTATGGCGA TGACACCCCG
CAGGCCTGGC AGAAACTGGC GAAGAAAACT GTCACCGTCA CCAAAGGCTG GAGCGAAGCC
TACGGCCTGT TTTTAAAAGG TGAAAGCGAT CTGGTACTGA GTTACACCAC CTCTCCGGCT
TATCACATTC TCGAAGAGAA AAAAGATAAC TACGCCGCCG CGAACTTTAG CGAAGGTCAC
TATCTGCAGG TGGAAGTCGC CGCCCGCACC GCTGCCAGCA AGCAGCCGGA GCTGGCGCAA
AAATTTCTCC AGTTTATGGT TTCTCCGGCT TTCCAGAATG CGATCCCAAC CGGCAACTGG
ATGTATCCGG TGGCAAATGT CACGCTGCCT GCCGGGTTTG AACAATTGAC CAAACCAGCA
ACCACGCTGG AGTTCACGCC AGCCGAAGTG GCGGCACAAC GTCAGGCATG GATTAGCGAA
TGGCAACGCG CCGTCAGCCG TTAA
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| Protein sequence | MLKKCLPLLL LCTAPVFAKP VLTVYTYDSF AADWGPGPVV KKAFEADCNC ELKLVALEDG
VSLLNRLRME GKNSKADVVL GLDNNLLDAA SKTGLFAKSG VAADAINVPG GWNNDTFVPF
DYGYFAFVYD KNKLKNPPQS LKELVESDQN WRVIYQDPRT STPGLGLLLW MQKVYGDDTP
QAWQKLAKKT VTVTKGWSEA YGLFLKGESD LVLSYTTSPA YHILEEKKDN YAAANFSEGH
YLQVEVAART AASKQPELAQ KFLQFMVSPA FQNAIPTGNW MYPVANVTLP AGFEQLTKPA
TTLEFTPAEV AAQRQAWISE WQRAVSR
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