Gene EcolC_3556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3556 
Symbol 
ID6065178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3886982 
End bp3887725 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content51% 
IMG OID641602973 
Producthypothetical protein 
Protein accessionYP_001726497 
Protein GI170021543 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0592324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00149643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGACCC AGGTCCTTTT TGAACATCCA CTAAATGAAA AAATGCGTAC ATGGCTGCGC 
ATTGAGTTTT TGATTCAGCA ACTCACCGTT AATTTACCCA TCGTTGACCA CGCTGGCGCG
CTGCATTTCT TCCGTAATGT CAGTGAATTA CTGGATGTTT TCGAGCGCGG CGAAGTCCGC
ACTGAGCTGT TGAAAGAACT TGACCGGCAG CAACGTAAAC TCCAGACCTG GATTGGCGTG
CCTGGCGTGG ACCAGAGCCG TATTGAAGCA TTAATTCAGC AGTTAAAAGC GGCGGGGAGC
GTATTAATTT CCGCGCCGCG TATCGGGCAA TTTCTGCGTG AAGATCGTTT GATTGCTCTG
GTGCGTCAGC GACTGAGCAT CCCAGGCGGC TGTTGCAGCT TTGATTTACC TACATTGCAC
ATTTGGCTGC ATCTACCCCA GGCGCAGCGC GACAGCCAGG TAGAAACCTG GATTGCCAGC
CTGAACCCGC TCACCCAGGC ACTTACCATG GTGCTGGATT TAATTCGCCA GTCGGCCCCC
TTCCGTAAAC AAACCAGCCT GAATGGTTTT TATCAGGATA ACGGTGGCGA TGCCGACTTG
CTGCGCCTGA ATCTGTCGCT CGATTCACAG CTTTATCCGC AAATTTCCGG ACATAAGAGC
CGTTTTGCCA TTCGTTTTAT GCCGCTGGAC ACTGAAAACG GACAGGTACC GGAACGTCTG
GATTTCGAAC TGGCCTGTTG CTAA
 
Protein sequence
MQTQVLFEHP LNEKMRTWLR IEFLIQQLTV NLPIVDHAGA LHFFRNVSEL LDVFERGEVR 
TELLKELDRQ QRKLQTWIGV PGVDQSRIEA LIQQLKAAGS VLISAPRIGQ FLREDRLIAL
VRQRLSIPGG CCSFDLPTLH IWLHLPQAQR DSQVETWIAS LNPLTQALTM VLDLIRQSAP
FRKQTSLNGF YQDNGGDADL LRLNLSLDSQ LYPQISGHKS RFAIRFMPLD TENGQVPERL
DFELACC