Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3511 |
Symbol | |
ID | 6068639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3835259 |
End bp | 3837733 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641602928 |
Product | ATP-dependent RNA helicase HrpB |
Protein accession | YP_001726452 |
Protein GI | 170021498 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.661022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACAAT GTGGCGCGAA GAATGTTAAC CCTCTGGAGC GTTTTGTGTC GTCGTTGCCC GTTGCTGCCG TCTTACCTGA ATTACTTACC GCTCTCGATT GTGCGCCGCA GGTATTATTA AGTGCGCCGA CCGGGGCCGG GAAATCAACC TGGCTGCCGC TGCAATTGCT GGCGCATCCC GGCATTAACG GAAAAATTAT CCTGCTGGAG CCGCGTCGTC TGGCGGCGCG TAACGTCGCG CAACGGCTGG CGGAGCTGCT TAACGAAAAG CCAGGCGATA CCGTTGGCTA CCGGATGCGT GCGCAAAACT GCGTCGGGCC GAATACCCGC CTGGAAGTAG TTACCGAAGG CGTGCTGACG CGGATGATCC AGCGTGACCC GGAACTGAGC GGTGTTGGAC TGGTGATCCT TGATGAATTT CATGAGCGCA GCTTGCAGGC GGATTTGGCG TTGGCGCTGT TACTCGATGT GCAACAAGGT CTGCGTGATG ACCTTAAACT GCTGATTATG TCGGCTACGC TGGACAACGA CCGCTTGCAG CAAATGCTGC CAGAAGCGCC CGTCGTCATC TCAGAAGGGC GCTCGTTTCC GGTTGAACGC CGTTATTTAC CGCTGCCCGC GCATCAGCGT TTTGACGAAG CCGTCGCGGT TGCCACCGCC GAAATGCTGC GTCAGGAAAG TGGATCATTA CTGTTATTTT TAACTGGCGT CGGAGAAATT CAGCGTGTGC AGGAACAACT GGCTTCGCGC ATCGGCAGTG ATGTGTTGCT CTGCCCGCTG TATGGCGCGT TGTCGCTGAA CGATCAGCGA AAAGCGATCC TCCCGGCACC GCAAGGGATG CGCAAAGTGG TGCTGGCGAC CAATATTGCT GAAACCAGTT TAACCATCGA AGGTATTCGT CTGGTGGTGG ATTGTGCCCA GGAGCGTGTG GCGCGCTTTG ATCCGCGCAC GGGGCTTACG CGGCTGATTA CTCAACGCGT TAGCCAGGCA TCCATGACGC AGCGTGCCGG GCGCGCCGGG CGTCTGGAGC CGGGTATCTG CCTGCATTTA ATCGCCAAGG AACAAGCAGA ACGCGCCGCG GCGCAAAGTG AACCGGAAAT ATTACAAAGC GATCTTTCCG GTTTGCTGAT GGAATTACTG CAATGGGGAT GCAGCGATCC GACGCAGATG AGCTGGCTGG ATCAACCGCC AACGGTGAAT CTACTGGCCG CGAAACGCCT GTTACGGATG CTGGGGGCGC TGGACGGTGA ACGGCTTAGT GCGCAAGGGC AAAAAATGGC AGCGCTGGGT AACGATCCGC GTTTAGCGGC AATGCTGGTT AGCGCGAAGA ACGACGACGA AGCTGCTACC GCGGCAAAAA TTGCCGCCAT TCTCGAAGAG CCGCCACGGA TGGGCAATAG TGACCTGGGC GTGGCGTTTT CGCGCAATCA ACCAGCCTGG CAGCAACGTA GTCAGCAACT GTTAAAACGC TTAAACGTAC GCGGCGGTGA GGCAGACAGT TCGCTTATCG CGCCGCTACT TGCCGGGGCG TTTGCCGATC GCATTGCTCG CCGCCGTGGG CAAGATGGAC GCTATCAACT GGCAAACGGC ATGGGAGCGA TGCTCGATGC CGACGACGCG CTAAGCCGCC ACGAATGGTT GATCGCACCG TTATTATTGC AGGGCAGCGC CTCGCCGGAT GCGCGGATTT TACTGGCGCT ACCGGTCGAT ATTGATGAAT TAGTGCGACG CTGTCCGCAG CTGGTGCAGC AATCTGACAC CGTGGAATGG GATGACGCGC AAGGTACGCT GAAAGCCTGG CGTCGGCTGC AAATCGGTCA GTTGACGGTG AAAGTGCAGC CGTTGGCGAA ACCGTCAGAA GACGAGTTGC ATCAGGCGAT GCTTAATGGC ATCCGTGATA AAGGTTTAAG CGTGCTCAAC TGGACGGCGG AAGCGGAACA GCTACGCTTG CGTTTGTTAT GCGCCGCAAA GTGGTTGCCG GAATATGACT GGCCTGCGGT TGATAATGAA AGTTTGTTGG CGACGCTGGA AACGTGGCTG CTGCCACATA TGACCGGCGT GCATTCACTA CGCGGCCTGA AATCACTCGA CATTTATCAG GCACTACGCG GATTACTTGA TTGGGGAATG CAGCAACGTC TGGATAGTGA ATTGCCTGCG CATTACACTG TGCCGACGGG AAGCCGGATC GCCATTCGTT ATCATGAAGA TAACCCGCCC GCGCTGGCGG TGAGAATGCA GGAGATGTTT GGTGAGGCCA CCAATCCGAC GATCGCCCAG GGGCGCGTGC CGCTGGTGCT GGAGTTGCTT TCCCCTGCCC AAAGGCCATT ACAAATCACA CGAGATTTGA GCGCCTTCTG GAAAGGAGCG TACCGTGAGG TGCAAAAAGA GATGAAAGGG CGTTATCCCA AACATGTCTG GCCGGACGAC CCGGCAAACA CTGCACCGAC GCGACGGACG AAAAAGTATT CGTAA
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Protein sequence | MLQCGAKNVN PLERFVSSLP VAAVLPELLT ALDCAPQVLL SAPTGAGKST WLPLQLLAHP GINGKIILLE PRRLAARNVA QRLAELLNEK PGDTVGYRMR AQNCVGPNTR LEVVTEGVLT RMIQRDPELS GVGLVILDEF HERSLQADLA LALLLDVQQG LRDDLKLLIM SATLDNDRLQ QMLPEAPVVI SEGRSFPVER RYLPLPAHQR FDEAVAVATA EMLRQESGSL LLFLTGVGEI QRVQEQLASR IGSDVLLCPL YGALSLNDQR KAILPAPQGM RKVVLATNIA ETSLTIEGIR LVVDCAQERV ARFDPRTGLT RLITQRVSQA SMTQRAGRAG RLEPGICLHL IAKEQAERAA AQSEPEILQS DLSGLLMELL QWGCSDPTQM SWLDQPPTVN LLAAKRLLRM LGALDGERLS AQGQKMAALG NDPRLAAMLV SAKNDDEAAT AAKIAAILEE PPRMGNSDLG VAFSRNQPAW QQRSQQLLKR LNVRGGEADS SLIAPLLAGA FADRIARRRG QDGRYQLANG MGAMLDADDA LSRHEWLIAP LLLQGSASPD ARILLALPVD IDELVRRCPQ LVQQSDTVEW DDAQGTLKAW RRLQIGQLTV KVQPLAKPSE DELHQAMLNG IRDKGLSVLN WTAEAEQLRL RLLCAAKWLP EYDWPAVDNE SLLATLETWL LPHMTGVHSL RGLKSLDIYQ ALRGLLDWGM QQRLDSELPA HYTVPTGSRI AIRYHEDNPP ALAVRMQEMF GEATNPTIAQ GRVPLVLELL SPAQRPLQIT RDLSAFWKGA YREVQKEMKG RYPKHVWPDD PANTAPTRRT KKYS
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