Gene EcolC_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3507 
Symbol 
ID6068591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3828328 
End bp3829218 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content55% 
IMG OID641602924 
Productiron-hydroxamate transporter substrate-binding subunit 
Protein accessionYP_001726448 
Protein GI170021494 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000933155 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGCT TACCTCTTAT TTCGCGCCGT CGACTGTTAA CGGCGATGGC GCTTTCTCCG 
TTGTTATGGC AGATGAATAC CGCCCACGCG GCGGCTATTG ACCCCAATCG TATTGTGGCG
CTGGAGTGGT TGCCGGTGGA ATTACTGCTG GCGCTCGGCA TCGTGCCTTA CGGCGTGGCG
GATACCATCA ACTATCGCCT GTGGGTCAGC GAACCACCAT TGCCGGACTC AGTGATTGAC
GTCGGTTTGC GTACAGAACC TAACCTTGAA CTGCTGACCG AAATGAAACC GTCGTTTATG
GTCTGGTCGG CAGGATATGG CCCTTCACCA GAAATGCTGG CACGTATTGC GCCGGGTCGC
GGATTTAACT TCAGTGACGG CAAACAGCCG TTGGCGATGG CGCGTAAATC GCTGACGGAA
ATGGCAGATT TACTTAACCT GCAAAGCGCA GCGGAAACGC ATTTAGCGCA ATACGAAGAC
TTTATCCGCA GCATGAAACC CCGCTTTGTG AAGCGTGGTG CACGCCCGTT ACTGCTGACG
ACGCTTATCG ATCCGCGCCA TATGCTGGTC TTCGGTCCAA ACAGCTTGTT CCAGGAAATT
CTCGATGAGT ACGGCATCCC AAATGCCTGG CAAGGGGAAA CCAACTTCTG GGGCAGTACC
GCCGTCAGTA TCGATCGTCT GGCGGCGTAT AAAGACGTTG ATGTGCTCTG TTTTGATCAC
GACAACAGCA AAGACATGGA TGCGCTAATG GCAACCCCGC TGTGGCAGGC CATGCCGTTT
GTCCGCGCCG GACGCTTTCA GCGCGTACCT GCAGTCTGGT TTTATGGTGC GACGCTATCG
GCAATGCACT TTGTGCGCGT TCTGGATAAC GCCATCGGAG GTAAAGCGTG A
 
Protein sequence
MSGLPLISRR RLLTAMALSP LLWQMNTAHA AAIDPNRIVA LEWLPVELLL ALGIVPYGVA 
DTINYRLWVS EPPLPDSVID VGLRTEPNLE LLTEMKPSFM VWSAGYGPSP EMLARIAPGR
GFNFSDGKQP LAMARKSLTE MADLLNLQSA AETHLAQYED FIRSMKPRFV KRGARPLLLT
TLIDPRHMLV FGPNSLFQEI LDEYGIPNAW QGETNFWGST AVSIDRLAAY KDVDVLCFDH
DNSKDMDALM ATPLWQAMPF VRAGRFQRVP AVWFYGATLS AMHFVRVLDN AIGGKA