Gene EcolC_3477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3477 
SymbolrnhB 
ID6068291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3794704 
End bp3795300 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content56% 
IMG OID641602893 
Productribonuclease HII 
Protein accessionYP_001726418 
Protein GI170021464 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000111932 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAT TTGTTTATCC GCACACGCAC CTGGTTGCGG GTGTGGATGA AGTCGGACGC 
GGGCCGTTAG TTGGCGCGGT CGTCACCGCT GCGGTGATTC TCGACCCGGC GCGCCCGATT
GCCGGGCTGA ATGATTCCAA AAAGCTGAGC GAAAAACGTC GTCTGGCGCT CTGTGAAGAG
ATCAAAGAGA AAGCGTTGAG CTGGAGTCTG GGCCGCGCGG AACCCTACGA AATCGACGAG
CTGAACATTC TTCATGCGAC CATGCTGGCG ATGCAGCGAG CCGTCGCTGG GCTGCATATT
GCGCCGGAAT ATGTGTTGAT TGATGGTAAC CGCTGCCCGA AATTACCGAT GCCTTCGATG
GCAGTGGTGA AAGGCGATAG CCGCGTACCG GAAATCAGTG CCGCGTCTAT CCTGGCGAAA
GTGACGCGCG ACGCCGAAAT GGCGGCGCTG GATATTGTTT TCCCGCAATA TGGTTTTGCC
CAACATAAAG GGTATCCAAC CGCTTTTCAT CTGGAAAAAC TGGCTGAATA TGGCGCGACT
GAACATCATC GTCGCAGCTT TGGGCCTGTC AAACGCGCAC TGGGACTTGC GTCCTGA
 
Protein sequence
MIEFVYPHTH LVAGVDEVGR GPLVGAVVTA AVILDPARPI AGLNDSKKLS EKRRLALCEE 
IKEKALSWSL GRAEPYEIDE LNILHATMLA MQRAVAGLHI APEYVLIDGN RCPKLPMPSM
AVVKGDSRVP EISAASILAK VTRDAEMAAL DIVFPQYGFA QHKGYPTAFH LEKLAEYGAT
EHHRRSFGPV KRALGLAS