Gene EcolC_3472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3472 
SymboltilS 
ID6068250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3786164 
End bp3787462 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID641602888 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001726413 
Protein GI170021459 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.878016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.473347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCA CGCTCAATAG ACAACTTCTC ACCTCACGCC AGATTCTGGT GGCCTTTAGC 
GGCGGGCTTG ACTCCACCGT TCTGCTGCAT CAGTTGGTGC AGTGGCGGAC GGAAAATCCG
GGCGTCACTC TGCGCGCTAT TCATGTGCAT CACGGTTTAA GTGCCAATGC CGATGCCTGG
GTTACGCATT GCGAAAACGT CTGCCAACAG TGGCAGGTGC CGCTGGTGGT CGAACGCGTA
CAACTTGCGC AAGAGGGGCT GGGGATTGAG GCCCAGGCGC GGCAGGCGCG TTATCAGGCA
TTTGCCCGTA CCCTATTGCC CGGCGAAGTG CTGGTCACCG CGCAACATCT CGACGATCAA
TGTGAAACCT TTCTGCTGGC GCTAAAACGC GGTAGCGGCC CTGCCGGGCT TTCGGCTATG
GCGGAAGTTT CGGAGTTTGC CGGAACACGG CTTATCCGCC CGTTGCTTGC CCGCACGCGG
GGGGAACTGG CGCAGTGGGC ATTGGCGCAT GGTTTACGCT GGATTGAAGA CGAAAGTAAT
CAGGACGACT CATACGATCG TAACTTTCTG CGCCTGCGCG TAGTGCCGTT ATTGCAGCAG
CGTTGGCCGC ATTTTGCCGA AGCAACGGCC CGCAGCGCCG CACTTTGTGC TGAACAAGAG
AGTCTGTTGG ATGAACTGCT GGCGGATGAT TTAGCACACT GCCAAACGTC GCAGGGGACG
CTGCAGATTG CGCCAATGCT GGCGATGAGT GATGCCCGCC GCGCGGCGAT TATCCGTCGC
TGGCTGGCAG GGCAGAATGC ACCAATGCCT TCCCGCGACG CGCTGGTGCG GATCTGGCAG
GAAGTGGCGC TGGCGCGGGA AGATGCCTCC CCCTGTTTAC GCTTGGGCGC GTTTGAAATC
CGCCGATATC AGTCGCAACT GTGGTGGATT AAATCCGTCA CCGGGCAAAG TGAAACCATT
GTGCCGTGGC AGACGTGGCT ACAACCGCTG GAATTACCGG CGGGGCTGGG AAGCGTACAG
CTTACTGCGG GAGGCGATAT TCGCCCTCCG CGTGCAGACG AAGCGGTCAG CGTGCGTTTC
AAAGCGGCAG GATTGCTGCA TATTGTCGGG CGCAACGGCG GACGTAAGCT GAAGAAAATC
TGGCAAGAGT TAGGCGTGCC GCCGTGGCTA CGTGACACCA CGCCACTGCT GTTTTATAGC
GAAACGCTGA TTGCGGCGGC AGGGGTATTT GTGACGCAAG AAGGTGTGGC TGAAGGTGAG
AATGGCGTAA GTTTTGTCTG GCAGAAAACG CTTAGTTAA
 
Protein sequence
MTLTLNRQLL TSRQILVAFS GGLDSTVLLH QLVQWRTENP GVTLRAIHVH HGLSANADAW 
VTHCENVCQQ WQVPLVVERV QLAQEGLGIE AQARQARYQA FARTLLPGEV LVTAQHLDDQ
CETFLLALKR GSGPAGLSAM AEVSEFAGTR LIRPLLARTR GELAQWALAH GLRWIEDESN
QDDSYDRNFL RLRVVPLLQQ RWPHFAEATA RSAALCAEQE SLLDELLADD LAHCQTSQGT
LQIAPMLAMS DARRAAIIRR WLAGQNAPMP SRDALVRIWQ EVALAREDAS PCLRLGAFEI
RRYQSQLWWI KSVTGQSETI VPWQTWLQPL ELPAGLGSVQ LTAGGDIRPP RADEAVSVRF
KAAGLLHIVG RNGGRKLKKI WQELGVPPWL RDTTPLLFYS ETLIAAAGVF VTQEGVAEGE
NGVSFVWQKT LS