Gene EcolC_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3450 
Symbol 
ID6067968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3762929 
End bp3763669 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content51% 
IMG OID641602860 
ProductDNA polymerase III subunit epsilon 
Protein accessionYP_001726391 
Protein GI170021437 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.258177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA TGAGCACTGC AATTACACGC CAGATCGTTC TCGATACCGA AACCACCGGT 
ATGAACCAGA TTGGTGCGCA CTATGAAGGC CACAAGATCA TTGAGATTGG TGCCGTTGAA
GTGGTGAACC GTCGCCTGAC GGGCAATAAC TTCCATGTTT ATCTCAAACC CGATCGGCTG
GTGGATCCGG AAGCCTTTGG CGTACATGGT ATTGCCGATG AATTTTTGCT CGATAAGCCC
ACGTTTGCCG AAGTAGCCGA TGAGTTCATG GACTATATCC GCGGCGCGGA GTTGGTGATC
CATAACGCAG CGTTCGATAT CGGCTTTATG GACTACGAGT TTTCGTTGCT TAAGCGCGAT
ATTCCGAAGA CCAATACCTT CTGTAAGGTC ACCGATAGCC TTGCGGTGGC GAGGAAAATG
TTTCCTGGTA AGCGCAACAG CCTCGATGCG TTATGTGCCC GCTACGAAAT AGATAACAGT
AAACGAACGC TACACGGGGC ATTACTCGAT GCCCAGATCC TTGCGGAAGT TTATCTGGCG
ATGACCGGTG GTCAAACGTC GATGGCTTTT GCGATGGAAG GAGAGACACA ACAGCAACAA
GGTGAAGCAA CAATTCAGCG CATTGTACGT CAGGCAAGTA AGTTACGCGT TGTTTTTGCG
ACAGATGACG AGCTTGCAGC ACATGAAGCC CGTCTTGATC TGGTGCAGAA GAAGGGCGGA
AGCTGCCTCT GGCGGGCATA A
 
Protein sequence
MTAMSTAITR QIVLDTETTG MNQIGAHYEG HKIIEIGAVE VVNRRLTGNN FHVYLKPDRL 
VDPEAFGVHG IADEFLLDKP TFAEVADEFM DYIRGAELVI HNAAFDIGFM DYEFSLLKRD
IPKTNTFCKV TDSLAVARKM FPGKRNSLDA LCARYEIDNS KRTLHGALLD AQILAEVYLA
MTGGQTSMAF AMEGETQQQQ GEATIQRIVR QASKLRVVFA TDDELAAHEA RLDLVQKKGG
SCLWRA