Gene EcolC_3425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3425 
Symbol 
ID6067839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3743736 
End bp3745121 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content50% 
IMG OID641602837 
Productcopper/silver efflux system outer membrane protein CusC 
Protein accessionYP_001726369 
Protein GI170021415 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAT TAAAATTACT TAGCATCAGT ACCATATTCA TCCTGGCAGG TTGTGTTTCT 
CTGGCACCTG AATATCAGCG TCCGCCAGCT CCGGTTCCCC AGCAGTTTTC ATTGTCTAAA
AACAGTCTGA CGCCTGCGGT AAACAGCTAT CAGGATACGG GCTGGCGAAA CTTTTTTGTC
GATCCCCAGG TCAGCAGGCT GATCGGTGAA GCCCTGAATA ATAACCGTGA TTTGAGAATG
GCTGCCCTGA AGGTTGAAGA GGCCCGGGCC CAGTTCAACG TCACGGATGC AGATCGTTAT
CCCCAACTGA ATGCCTCATC CGGGATTACA TACAGCGGTG GTCTGAAAGG TGACAAGCCG
ACCACGCAGG AGTACGACGC GGGTCTGGAG CTCAGCTATG AGCTCGATTT TTTTGGCAAA
CTTAAGAACA TGAGTGAGGC TGATCGCCAG AACTACTTTG CCAGCGAAGA AGCCCGTCGT
GCCGTACACA TCCTGCTGGT CTCCAACGTT TCACAGAGCT ATTTCAGCCA GCAACTGGCG
TACGAACAAC TCCGTATTGC GCGGGAAACG CTGAAAAATT ATGAACAGTC TTATGCATTC
GTTGAGCAAC AACTGGTGAC CGGGAGTACG AACGTTCTGG CGCTTGAACA AGCCAGGGGG
CAAATCGAAA GTACCCGCGC CGAAATAGCC AAACGAGAAG GCGATCTGGC TCAGGCAAAC
AATGCCCTGC AACTGGTGCT TGGAACGTAC CGCGCAGTTC CGTCAGAAAA AGGGATGAAA
GGTGGGGAGA TCGCACCAGT AAAATTGCCA CCAAATCTGT CGTCACAAAT ATTGCTGCAG
CGTCCGGATA TTATGGAAGC GGAATACCAG TTGAAAGCGG CTGATGCCAA TATTGGCGCA
GCGCGAGCGG CTTTTTTCCC GTCCATTACC CTGACCAGTG GTCTCTCCTC AAGCAGTACG
GAGCTGTCCA GCCTCTTTAC GTCAGGAAGT GGAATGTGGA ATTTTATTCC TAAAATTGAA
ATTCCTATAT TTAATGCTGG CAGGAACAAA GCCAATCTGA AGCTGGCTGA AATTCGCCAG
CAACAGTCGG TGGTTAATTA CGAACAAAAA ATTCAGTCAG CCTTTAAAGA TGTTTCCGAC
ACGCTTGCGC TGCGCGACAG CCTTAGCCAG CAACTTGAGT CACAGCAGCG TTATCTTGAT
TCACTACAGA TAACTCTACA GCGTGCCAGA GGATTGTATG CAAGTGGTGC TGTCAGTTAC
ATCGAAGTGC TGGATGCAGA ACGTTCCCTC TTCGCGACGC AGCAAACCAT TCTCGATCTT
ACCTATTCCC GACAGGTTAA CGAAATTAAT CTGTTTACCG CGCTGGGTGG CGGTTGGGTA
GAGTAA
 
Protein sequence
MFKLKLLSIS TIFILAGCVS LAPEYQRPPA PVPQQFSLSK NSLTPAVNSY QDTGWRNFFV 
DPQVSRLIGE ALNNNRDLRM AALKVEEARA QFNVTDADRY PQLNASSGIT YSGGLKGDKP
TTQEYDAGLE LSYELDFFGK LKNMSEADRQ NYFASEEARR AVHILLVSNV SQSYFSQQLA
YEQLRIARET LKNYEQSYAF VEQQLVTGST NVLALEQARG QIESTRAEIA KREGDLAQAN
NALQLVLGTY RAVPSEKGMK GGEIAPVKLP PNLSSQILLQ RPDIMEAEYQ LKAADANIGA
ARAAFFPSIT LTSGLSSSST ELSSLFTSGS GMWNFIPKIE IPIFNAGRNK ANLKLAEIRQ
QQSVVNYEQK IQSAFKDVSD TLALRDSLSQ QLESQQRYLD SLQITLQRAR GLYASGAVSY
IEVLDAERSL FATQQTILDL TYSRQVNEIN LFTALGGGWV E