Gene EcolC_3418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3418 
Symbol 
ID6067773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3734681 
End bp3735418 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content47% 
IMG OID641602830 
Productpeptidase M23B 
Protein accessionYP_001726362 
Protein GI170021408 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTCTA CCGATGTCGT AAAAGAAAAT GCCTACCTTT CAGCCACCCG CTCGGGGCTG 
GAATCGAACG AGATCGCTAC TCTTCAGCGC TCCTTGCCTT CCCGGTTTAA TCTGCGGCAT
TTGAAAAAAA ATGAATCATT AAAACTCGTA CTGCAAAAGA AAGCGGGAAA ATCACGTGTC
GTGGCCTATA AATTTACGTC CGGTTCATTT AATTACACGG CGTATCGTAT ATCAGATAAA
AAGTTCTATA ACCTTTCCGA TACTTCCGGG AAAGGCAGTC TCGATTATCC GTTACCGGCC
ACAGCAAGAC TCAGTTCGCC TTTCAATCCT GCAAGACTTA ACCCGGTATC GGGAAAAGTG
AGTCCCCATA ATGGCATTGA TTATTCCATG CCCATGAACA CGAAAATAGT CAGCGTCATC
GACGGAAAAA TCACCCGGGC CGAATACAAC AGTACCATGG GATATTTTGT TGAAGTAACG
GGAAAAGCCG GTGTTAAAAC TCGCTATCTC CACCTCAATA AAATACTCGT TACTAAAGGG
GCCAGGGTTA CACGGGGAGG TGCTATTGCG TTATCCGGTA ACAGCGGACG TTCATCCGGT
CCTCATCTGC ATTACGAGCT GGTCATCAAT AACAACCCTG TTAACTCTCT GGCGTTCCGG
GCAGCGGCAC CCGCTGATAA CAAACTCGAA CAGCATGCCT TTGCGCATGT CAGAGACTAC
GAACGATACC TGGACTGA
 
Protein sequence
MYSTDVVKEN AYLSATRSGL ESNEIATLQR SLPSRFNLRH LKKNESLKLV LQKKAGKSRV 
VAYKFTSGSF NYTAYRISDK KFYNLSDTSG KGSLDYPLPA TARLSSPFNP ARLNPVSGKV
SPHNGIDYSM PMNTKIVSVI DGKITRAEYN STMGYFVEVT GKAGVKTRYL HLNKILVTKG
ARVTRGGAIA LSGNSGRSSG PHLHYELVIN NNPVNSLAFR AAAPADNKLE QHAFAHVRDY
ERYLD