| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3382 |
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| Symbol | fliF |
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| ID | 6067566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 3701393 |
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| End bp | 3703039 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641602796 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001726328 |
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| Protein GI | 170021374 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.275908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCAC AAATAAAGAA GTTAACCCAG GCGTTTCCGG CGTTTCGACT GCGTCTTGCA
GATAACAAAC GCTGGGCGCT GATGGCGGGA GTGGGGCTTG CCGTTGCGGC AACGGCGATT
ATCGTCAGCG TGCTGTGGAC CGGCAATCGC GGCTACGTCT CGCTCTACGG CCGCCAGGAA
AACCTGCCCG TTTCGCAGAT TGTCACCGTG CTGGACGGCG AAAAGCTCAG CTACCGCATC
GACCCGCAGA GCGGGCAGAT TCTGGTGCCG GAAGATGAAC TGTCGAAAAC GCGTATGACC
CTTGCCGCGA AAGGCGTGCA GGCGATATTG CCCAGCGGCT ACGAGCTGAT GGACAAAGAC
GAAGTGCTCG GCAGCAGCCA GTTCATGCAG AACGTGCGCT ACAAACGTAG TCTCGAAGGG
GAGCTGGCGC AGAGCATTAT GTCGCTGGAC GCGGTGGAGA GCGCGCGGGT GCATCTGGCG
CTCAACGAAG AAAGCTCGTT TGTGGTCAGC GATGAGCCGC AAAACAGCGC CTCGGTGGTG
GTGCGTCTGC ACTACGGCGC GAAGCTGAAT ATGGACCAGG TGAACGCCAT CGTGCATCTG
GTTTCCGGCA GTATTCCGGG GCTGCAGGCC AGCAAAGTCA GCGTCGTCGA TCAGGCGGGA
AATCTGCTAA CCGACGGCAT TGGCGCGGGC GAGGCGGTCT CTGCCGCTAC CCGTAAACGC
GATCAGATCC TCAAAGACAT TCAGGACAAA ACCCGCGCCA GCGTGGCGAA CGTGCTGGAT
TCGCTGGTCG GCAGCAGGAA TTACCGTGTC AGCGTGATGC CGGATCTCGA CCTCAGCACC
ATCGACGAAA CTCAGGAACA CTACGGAGAC GCGCCGAAAA TAAACCGCGA AGAGAGCGTG
CTGGACAGCG ACACCAATCA GGTGGCGATG GGTGTGCCCG GCTCTCTCAG CAACCGTCCG
CCGGTTGCGG CGAATCAGAT GACCAACGGC ACGGAAGAAA ATCGCTCGCC GGAAGCGTTA
TCCAAACACA GCGAAAGCAA GCGCGATTAC TCTTACGACC GCAGCGTCCA GCATATTCAG
CATCCCGGCT TTGCGGTGAA ACGCCTCAAC GTGGCGGTGG TGCTCAATCA AAACGCCCCG
GCGCTGAAAA ACTGGAAGCC GGAACAGACC ACGCAGCTTA CCGCGTTGCT GAACAATGCC
GCCGGGATCG ACGCGCAACG TGGAGATAAC CTGACGCTTT CACTGCTTAA CTTTGTCCCG
CAGGTGGTCC CGGTCGAACC GGTGATCCCG CTGTGGAAAG ATGACAGCGT GCTGGCCTGG
GTGCGGCTGA TTGGCTGCGG CCTGCTGGCG CTGTTGTTGC TGTTCTTTGT GGTGCGCCCG
GTAATGAAAC GCCTGACGGC GGTGCGTGCG CCGGTTATCA CACCAGAACC GGAAGCTGTC
AGCGAACCGT GGATCGCTAT GCCGGAAGAG GAGCGCAAAA ACGTCGATCT GCCGTCGCTG
CCCGGCGATG ACAGCCTGCC TTCGCAGAGT TCCGGCCTCG AAGTGAAACT CGAGTTCCTG
CAAAAACTGG CCATGAGCGA CACCGATCGC GTAGCCGAAG TTCTCAGACA ATGGATCACC
AGCAATGAGC GAATTGACAA CAAATAA
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| Protein sequence | MNAQIKKLTQ AFPAFRLRLA DNKRWALMAG VGLAVAATAI IVSVLWTGNR GYVSLYGRQE
NLPVSQIVTV LDGEKLSYRI DPQSGQILVP EDELSKTRMT LAAKGVQAIL PSGYELMDKD
EVLGSSQFMQ NVRYKRSLEG ELAQSIMSLD AVESARVHLA LNEESSFVVS DEPQNSASVV
VRLHYGAKLN MDQVNAIVHL VSGSIPGLQA SKVSVVDQAG NLLTDGIGAG EAVSAATRKR
DQILKDIQDK TRASVANVLD SLVGSRNYRV SVMPDLDLST IDETQEHYGD APKINREESV
LDSDTNQVAM GVPGSLSNRP PVAANQMTNG TEENRSPEAL SKHSESKRDY SYDRSVQHIQ
HPGFAVKRLN VAVVLNQNAP ALKNWKPEQT TQLTALLNNA AGIDAQRGDN LTLSLLNFVP
QVVPVEPVIP LWKDDSVLAW VRLIGCGLLA LLLLFFVVRP VMKRLTAVRA PVITPEPEAV
SEPWIAMPEE ERKNVDLPSL PGDDSLPSQS SGLEVKLEFL QKLAMSDTDR VAEVLRQWIT
SNERIDNK
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