Gene EcolC_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3333 
Symbol 
ID6067314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3656938 
End bp3657627 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID641602748 
Productputative xanthine dehydrogenase iron-sulfur-binding subunit 
Protein accessionYP_001726281 
Protein GI170021327 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.736454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC AAGGCGAATA CCCCGAAGAT AATCGGGTTG GGAAGCACGA GCCGCACGAT 
TTAAGTTTGA CCCGTCGCGA TCTGATTAAA GTGAGCGCCG CAACAGCGGC GACCGCCGTG
GTTTATCCTC ATTCTACGCT GGCGGCAAGC GTTCCGGCAG CTACACCCGC GCCAGAGATA
ATGCCCCTGA CACTGAAGGT GAACGGCAAA ACCGAGCAGC TTGAGGTGGA TACCCGAACC
ACGCTACTGG ACACTTTGCG TGAAAATCTG CATTTGATCG GTACCAAGAA AGGTTGCGAT
CACGGACAGT GCGGAGCCTG TACCGTGCTG GTCAATGGTC GCAGGCTTAA TGCCTGCCTG
ACGCTTGCAG TCATGCATCA GGGGGCCGAG ATCACCACCA TTGAAGGACT GGGTTCGCCA
GATAATCTTC ACCCCATGCA GGCGGCCTTT ATCAAGCATG ATGGCTTCCA GTGCGGCTAC
TGCACCTCCG GGCAAATTTG CTCATCAGTA GCGGCGCTAA AAGAGATTCA GGACGGCATT
CCAAGTCACG TCACGGTCGA TTTGGTTTCC GCTCCAGAAA CAACTGCCGA TGAGATCCGT
GAACGTATGA GCGGCAACAT CTGTCGCTGT GGTGCATACG CTAACATCCT TGCCGCCATT
GAAGATGCTG CGGGGGAGAT AAAATCATGA
 
Protein sequence
MSNQGEYPED NRVGKHEPHD LSLTRRDLIK VSAATAATAV VYPHSTLAAS VPAATPAPEI 
MPLTLKVNGK TEQLEVDTRT TLLDTLRENL HLIGTKKGCD HGQCGACTVL VNGRRLNACL
TLAVMHQGAE ITTIEGLGSP DNLHPMQAAF IKHDGFQCGY CTSGQICSSV AALKEIQDGI
PSHVTVDLVS APETTADEIR ERMSGNICRC GAYANILAAI EDAAGEIKS