| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3235 |
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| Symbol | |
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| ID | 6066781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3542694 |
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| End bp | 3543896 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641602650 |
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| Product | exonuclease subunit SbcD |
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| Protein accession | YP_001726184 |
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| Protein GI | 170021230 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.294623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000199407 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCATCC TTCACACCTC AGACTGGCAT CTCGGCCAGA ACTTCTACAG TAAAAGCCGC
GAAGCTGAAC ATCAGGCTTT TCTTGACTGG CTGCTGGAGA CAGCACAAAC CCATCAGGTG
GATGCGATTA TTGTTGCCGG TGATGTTTTC GATACCGGCT CGCCGCCCAG TTACGCCCGC
ACGTTATACA ACCGTTTTGT TGTCAATTTA CAGCAAACTG GCTGTCATCT GGTGGTACTG
GCAGGAAACC ATGACTCGGT CGCCACGCTG AATGAATCGC GCGATATCAT GGCGTTCCTC
AATACTACCG TGGTCGCCAG CGCCGGACAT GCGCCGCAAA TCTTGCCTCG TCGCGACGGG
ACGCCAGGCG CAGTGCTGTG CCCCATTCCG TTTTTACGTC CGCGTGACAT TATTACCAGC
CAGGCGGGGC TTAACGGTAT TGAAAAACAG CAGCATTTAC TGGCAGCGAT TACCGATTAT
TACCAACAAC ACTATGCCGA TGCCTGCAAA CTGCGCGGCG ATCAGCCTCT GCCCATCATC
GCCACGGGAC ATTTAACGAC CGTGGGGGCC AGTAAAAGTG ACGCCGTGCG TGACATTTAT
ATTGGCACGC TGGACGCGTT TCCGGCACAA AACTTTCCAC CAGCCGACTA CATCGCGCTC
GGGCATATTC ACCGCGCACA GATTATTGGC GGCATGGAAC ATGTTCGCTA TTGCGGCTCC
CCCATTCCGC TGAGTTTTGA TGAATGCGGT AAGAGTAAAT ATGTCCATCT GGTGACATTT
TCAAACGGCA AATTAGAGAG CGTAGAAAAC CTGAACGTAC CGGTAACGCA ACCCATGGCA
GTGCTGAAAG GCGATCTGGC GTCGATTACC GCACAGCTGG AACAGTGGCG CGATGTATCG
CAGGAGCCAC CTGTCTGGCT GGATATCGAA ATCACTACTG ATGAGTATCT GCATGATATT
CAGCGCAAAA TCCAGGCATT AACCGAATCA TTGCCTGTCG AAGTATTGCT GGTACGTCGG
AGTCGTGAAC AGCGCGAGCG TGTGTTAGCC AGCCAACAGC GTGAAACCCT CAGCGAACTC
AGCGTCGAAG AGGTGTTCAA TCGCCGTCTG GCACTGGAAG AACTGGATGA ATCGCAGCAG
CAACGTCTGC AGCATCTTTT CACCACGACG TTGCATACCC TCGCCGGAGA ACACGAAGCA
TGA
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| Protein sequence | MRILHTSDWH LGQNFYSKSR EAEHQAFLDW LLETAQTHQV DAIIVAGDVF DTGSPPSYAR
TLYNRFVVNL QQTGCHLVVL AGNHDSVATL NESRDIMAFL NTTVVASAGH APQILPRRDG
TPGAVLCPIP FLRPRDIITS QAGLNGIEKQ QHLLAAITDY YQQHYADACK LRGDQPLPII
ATGHLTTVGA SKSDAVRDIY IGTLDAFPAQ NFPPADYIAL GHIHRAQIIG GMEHVRYCGS
PIPLSFDECG KSKYVHLVTF SNGKLESVEN LNVPVTQPMA VLKGDLASIT AQLEQWRDVS
QEPPVWLDIE ITTDEYLHDI QRKIQALTES LPVEVLLVRR SREQRERVLA SQQRETLSEL
SVEEVFNRRL ALEELDESQQ QRLQHLFTTT LHTLAGEHEA
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