Gene EcolC_3228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3228 
SymbolqueA 
ID6066744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3533565 
End bp3534635 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content54% 
IMG OID641602643 
ProductS-adenosylmethionine:tRNA ribosyltransferase-isomerase 
Protein accessionYP_001726177 
Protein GI170021223 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0809] S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) 
TIGRFAM ID[TIGR00113] S-adenosylmethionine:tRNA ribosyltransferase-isomerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000197579 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGTTA CCGATTTCTC CTTTGAATTG CCCGAATCCC TGATTGCCCA CTATCCCATG 
CCTGAACGCA GTAGCTGTCG TTTACTGTTG CTGGACGGGC CGACGGGCGC GCTGACGCAC
GGTACTTTCA CCGATTTACT TGATAAGCTC AACCCCGGCG ATCTTCTGGT TTTTAATAAT
ACCCGCGTGA TCCCGGCGCG CCTGTTTGGG CGTAAAGCCA GCGGCGGCAA GATTGAAGTG
CTGGTTGAAC GGATGCTCGA CGACAAACGC ATTCTTGCGC ATATTCGCGC CTCGAAAGCG
CCAAAACCTG GCGCAGAACT GCTGCTGGGC GATGACGAAA GTATTAACGC AACAATGACC
GCGCGCCACG GCGCACTGTT TGAAGTCGAA TTTAATGATG AACGCTCGGT GCTGGATATT
CTCAACAGCA TCGGCCATAT GCCGCTGCCG CCGTATATCG ACCGTCCGGA CGAAGACGCT
GACCGCGAAC TTTATCAAAC CGTTTATAGC GAAAAACCGG GCGCGGTTGC AGCCCCGACC
GCAGGTCTGC ATTTTGACGA GCCTTTGCTG GAAAAATTGC GCGCCAAAGG CGTGGAGATG
GCGTTTGTGA CGTTGCACGT TGGTGCGGGC ACCTTCCAGC CGGTGCGCGT CGACACCATT
GAAGATCACA TCATGCACTC GGAATACGCT GAAGTACCGC AGGATGTGGT AGACGCGGTA
CTGGCGGCGA AAGCGCGCGG TAACCGGGTG ATTGCGGTTG GCACCACTTC AGTACGTTCG
CTGGAAAGCG CGGCTCAGGC AGCGAAAAAC GATCTCATTG AACCGTTCTT CGACGATACC
CAAATCTTTA TCTATCCGGG CTTCCAGTAC AAAGTGGTCG ATGCGCTGGT GACGAACTTC
CACTTGCCAG AGTCGACGCT GATTATGCTG GTTTCGGCCT TTGCCGGTTA TCAACACACC
ATGAACGCCT ATAAAGCAGC GGTAGAAGAG AAATATCGCT TTTTTAGTTA CGGTGATGCG
ATGTTTATCA CGTACAATCC GCAGGCAATT AATGAGCGCG TCGGGGAGTA A
 
Protein sequence
MRVTDFSFEL PESLIAHYPM PERSSCRLLL LDGPTGALTH GTFTDLLDKL NPGDLLVFNN 
TRVIPARLFG RKASGGKIEV LVERMLDDKR ILAHIRASKA PKPGAELLLG DDESINATMT
ARHGALFEVE FNDERSVLDI LNSIGHMPLP PYIDRPDEDA DRELYQTVYS EKPGAVAAPT
AGLHFDEPLL EKLRAKGVEM AFVTLHVGAG TFQPVRVDTI EDHIMHSEYA EVPQDVVDAV
LAAKARGNRV IAVGTTSVRS LESAAQAAKN DLIEPFFDDT QIFIYPGFQY KVVDALVTNF
HLPESTLIML VSAFAGYQHT MNAYKAAVEE KYRFFSYGDA MFITYNPQAI NERVGE