Gene EcolC_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3218 
SymbolribH 
ID6066713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3524530 
End bp3525000 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content52% 
IMG OID641602633 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001726167 
Protein GI170021213 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000123653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTA TTGAAGCTAA CGTTGCTACC CCGGACGCTC GCGTCGCCAT CACCATCGCG 
CGTTTCAACA ACTTTATCAA TGACAGCCTG CTGGAAGGTG CAATTGACGC ACTGAAACGT
ATCGGTCAGG TAAAAGATGA AAACATTACC GTTGTTTGGG TGCCTGGTGC CTATGAGCTG
CCGCTGGCGG CGGGTGCACT GGCTAAAACC GGTAAATACG ACGCGGTGAT TGCGCTGGGT
ACGGTTATTC GTGGTGGCAC TGCCCACTTT GAATATGTCG CTGGTGGTGC AAGCAACGGC
CTGGCGCATG TTGCCCAGGA CAGCGAAATT CCGGTTGCTT TTGGGGTTCT GACCACTGAA
AGCATTGAAC AAGCGATCGA ACGTGCTGGC ACCAAAGCTG GCAACAAAGG TGCAGAAGCT
GCACTGACCG CGCTTGAAAT GATTAATGTA TTGAAAGCCA TCAAGGCCTG A
 
Protein sequence
MNIIEANVAT PDARVAITIA RFNNFINDSL LEGAIDALKR IGQVKDENIT VVWVPGAYEL 
PLAAGALAKT GKYDAVIALG TVIRGGTAHF EYVAGGASNG LAHVAQDSEI PVAFGVLTTE
SIEQAIERAG TKAGNKGAEA ALTALEMINV LKAIKA