Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3212 |
Symbol | |
ID | 6066469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3518546 |
End bp | 3519445 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641602627 |
Product | geranyltranstransferase |
Protein accession | YP_001726161 |
Protein GI | 170021207 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000111364 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACTTTC CGCAGCAACT CGAAGCCTGC GTTAAGCAGG CCAACCAGGC GCTGAGCCGT TTTATCGCCC CACTGCCCTT TCAGAACACT CCCGTGGTCG AAACCATGCA GTATGGCGCA TTATTAGGTG GTAAGCGCCT GCGACCTTTT CTGGTTTATG CCACCGGTCA TATGTTCGGC GTTAGCACAA ACACGCTGGA CGCACCCGCT GCTGCCGTAG AGTGTATCCA CGCTTACTCA TTAATTCATG ATGATTTACC GGCGATGGAT AATGACGATC TGCGTCGCGG TTTGCCGACC TGCCATGTGA AGTTTGGCGA AGCGAACGCG ATTCTCGCTG GCGACGCTTT ACAAACGCTG GCGTTCTCGA TTTTAAGCGA TGCTGATATG CCGGAAGTGT CGGATCGCGA CAGAATTTCG ATGATTTCTG AACTGGCGAG CGCCAGCGGT ATTGCCGGAA TGTGTGGTGG TCAGGCGTTG GATTTAGACG CGGAAGGCAA ACACGTACCT CTGGACGCGC TTGAGCGTAT TCATCGTCAT AAAACCGGCG CATTGATTCG CGCCGCCGTT CGCCTTGGCG CATTAAGCGC CGGAGATAAA GGGCGTCGTG CTCTGCCAGT ACTCGACAAG TACGCAGAGA GCATCGGCCT TGCCTTCCAG GTTCAGGATG ACATCCTGGA TGTGGTAGGA GATACTGCAA CGTTGGGAAA ACGCCAGGGT GCCGACCAGC AACTTGGTAA AAGTACCTAC CCTGCACTTC TGGGTCTTGA GCAAGCCCGG AAGAAAGCCC GGGATCTGAT CGACGATGCC CGTCAGTCGC TGAAACAACT GGCTGAACAA TCACTCGATA CCTCGGCACT GGAAGCGCTA GCGGACTACA TCATCCAGCG TAATAAATAA
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Protein sequence | MDFPQQLEAC VKQANQALSR FIAPLPFQNT PVVETMQYGA LLGGKRLRPF LVYATGHMFG VSTNTLDAPA AAVECIHAYS LIHDDLPAMD NDDLRRGLPT CHVKFGEANA ILAGDALQTL AFSILSDADM PEVSDRDRIS MISELASASG IAGMCGGQAL DLDAEGKHVP LDALERIHRH KTGALIRAAV RLGALSAGDK GRRALPVLDK YAESIGLAFQ VQDDILDVVG DTATLGKRQG ADQQLGKSTY PALLGLEQAR KKARDLIDDA RQSLKQLAEQ SLDTSALEAL ADYIIQRNK
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