Gene EcolC_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3123 
Symbol 
ID6066357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3421844 
End bp3422614 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content54% 
IMG OID641602539 
Productshort chain dehydrogenase 
Protein accessionYP_001726073 
Protein GI170021119 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000111305 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAAAT CGGTCTTAAT TACCGGATGT TCCAGTGGAA TTGGCCTGGA AAGCGCGCTC 
GAATTAAAAC GCCAGGGTTT TCATGTGCTG GCAGGTTGCC GAAAACCGGA TGATGTTGAG
CGTATGAACA ACATGGGATT TACCGGCGTG TTGATCGATC TGGATTCACC AGAAAGTGTT
GATCGCGCAG CAGACGAGGT GATCGCCCTG ACCGATAATT GTCTGTATGG GATCTTTAAC
AATGCCGGAT TCGGCATGTA TGGCCCCCTT TCCACCATCA GCCGTGCGCA GATGGAACAG
CAGTTTTCCG CCAACTTTTT CGGCGCACAC CAGCTCACCA TGCGCCTGTT ACCCGCGATG
TTACCGCACG GTGAAGGGCG TATTGTGATG ACATCATCGG TGATGGGATT AATCTCCACG
CCGGGTCGTG GCGCTTACGC GGCCAGTAAA TATGCGCTGG AGGCGTGGTC AGACGCGCTG
CGCATGGAGC TACGCCACAG CGGAATTAAA GTCAGCCTGA TCGAACCCGG TCCCATTCGT
ACTCGCTTCA CCGACAACGT CAACCAGACG CAAAGTGATA AACCAGTCGA AAATCCCGGC
ATCGCCGCCC GCTTTACGTT GGGACCGGAA GCGGTGGTGG ACAAAGTACG CCATGCTTTT
ATTAGCGAGA AGCCGAAGAT GCGCTATCCG GTAACGCTGG TGACCTGGGC AGTAATGGTG
CTTAAGCGCC TGCTGCCGGG GCGCGTGATG GACAAAATAT TGCAGGGGTG A
 
Protein sequence
MQKSVLITGC SSGIGLESAL ELKRQGFHVL AGCRKPDDVE RMNNMGFTGV LIDLDSPESV 
DRAADEVIAL TDNCLYGIFN NAGFGMYGPL STISRAQMEQ QFSANFFGAH QLTMRLLPAM
LPHGEGRIVM TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELRHSGIK VSLIEPGPIR
TRFTDNVNQT QSDKPVENPG IAARFTLGPE AVVDKVRHAF ISEKPKMRYP VTLVTWAVMV
LKRLLPGRVM DKILQG