Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3123 |
Symbol | |
ID | 6066357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3421844 |
End bp | 3422614 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641602539 |
Product | short chain dehydrogenase |
Protein accession | YP_001726073 |
Protein GI | 170021119 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000111305 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAAAAT CGGTCTTAAT TACCGGATGT TCCAGTGGAA TTGGCCTGGA AAGCGCGCTC GAATTAAAAC GCCAGGGTTT TCATGTGCTG GCAGGTTGCC GAAAACCGGA TGATGTTGAG CGTATGAACA ACATGGGATT TACCGGCGTG TTGATCGATC TGGATTCACC AGAAAGTGTT GATCGCGCAG CAGACGAGGT GATCGCCCTG ACCGATAATT GTCTGTATGG GATCTTTAAC AATGCCGGAT TCGGCATGTA TGGCCCCCTT TCCACCATCA GCCGTGCGCA GATGGAACAG CAGTTTTCCG CCAACTTTTT CGGCGCACAC CAGCTCACCA TGCGCCTGTT ACCCGCGATG TTACCGCACG GTGAAGGGCG TATTGTGATG ACATCATCGG TGATGGGATT AATCTCCACG CCGGGTCGTG GCGCTTACGC GGCCAGTAAA TATGCGCTGG AGGCGTGGTC AGACGCGCTG CGCATGGAGC TACGCCACAG CGGAATTAAA GTCAGCCTGA TCGAACCCGG TCCCATTCGT ACTCGCTTCA CCGACAACGT CAACCAGACG CAAAGTGATA AACCAGTCGA AAATCCCGGC ATCGCCGCCC GCTTTACGTT GGGACCGGAA GCGGTGGTGG ACAAAGTACG CCATGCTTTT ATTAGCGAGA AGCCGAAGAT GCGCTATCCG GTAACGCTGG TGACCTGGGC AGTAATGGTG CTTAAGCGCC TGCTGCCGGG GCGCGTGATG GACAAAATAT TGCAGGGGTG A
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Protein sequence | MQKSVLITGC SSGIGLESAL ELKRQGFHVL AGCRKPDDVE RMNNMGFTGV LIDLDSPESV DRAADEVIAL TDNCLYGIFN NAGFGMYGPL STISRAQMEQ QFSANFFGAH QLTMRLLPAM LPHGEGRIVM TSSVMGLIST PGRGAYAASK YALEAWSDAL RMELRHSGIK VSLIEPGPIR TRFTDNVNQT QSDKPVENPG IAARFTLGPE AVVDKVRHAF ISEKPKMRYP VTLVTWAVMV LKRLLPGRVM DKILQG
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