| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3077 |
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| Symbol | |
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| ID | 6066183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3364638 |
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| End bp | 3366539 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641602493 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001726028 |
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| Protein GI | 170021074 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG GATTACGTTT CACACTGGAA GTGGACGGCC TGCCGCCGGA TGCTTTTGCG
GTGGTTTCCT TTCATCTGAA CCAGTCACTC TCTTCGCTCT TTTCCCTCGA TCTCTCCCTG
GTCAGCCAGC AGTTTCTCTC CCTTGAATTT GCGCAGGTGC TGGACAAAAT GGCCTACCTG
ACGATATGGC AGGGCGATGA AGTACAGCGC CGGGTGAAAG GCGTGGTGAC CTGGTTTGAA
CTCGGGGAGA ACGACAAAAA CCAGATGCTG TACAGCATGA AGGTGCACCC GCCGCTGTGG
CGTGCCGGTC TGCGCCAGAA CTTCCGTATC TTCCAGAACG AGGACATCAA AAGCATCCTC
GGCACGATGT TGCAGGAAAA CGGGGTGACC GAATGGAGTC CGCTGTTCAG CGAGCCGCAT
CCTTCCCGTG AGTTTTGTGT CCAGTACGGT GAGACTGATT ACGATTTTCT GTGCCGGATG
GCGGCGGAGG AAGGCATCTT CTTTTATGAG GAGCATGCTT ACAAAAGTAC CGACCAGAGC
CTGGTGCTGT GCGACACAGT CCGCCATCTG CCCGAATCTT TTGAAATCCC ATGGAACCCG
AACACCCGTA CCGAGGTGAG CACCCTCTGC ATCAGCCAGT TCCGCTACAG CGCACAAATC
CGCCCTTCTT CCGTGGTGAC CAAAGACTAC ACCTTTAAAC GCCCCGGCTG GGCCGGACGT
TTTGAACAGG AAGGCCAGCA CCAGGACTAC CAGCGCACGC AGTATGAAGT GTATGACTAC
CCCGGACGTT TCAAGAGCGC CCACGGGCAG AACTTTGCCC GCTGGCAGAT GGACGGCTGG
CGAAACAACG CAGAAACCGC GCGGGGAATG AGCCGCTCGC CGGAGATATG GCCGGGACGG
CGAATTGTGC TGACGGGGCA TCCGCAGGCG AACCTGAACC GGGAATGGCA GGTGGTGGCA
AGTGAACTGC ACGGCGAACA GCCACAGGCG GTGCCAGGAC GGCAGGGAGC GGGGACGGCG
CTGGAGAACC ATTTTGCGGT GATCCCGGCA GACAGAACAT GGCGACCACA GCCGTTGCTG
AAACCGCTGG TCGACGGCCC GCAGAGCGCT GTCGTGACAG GACCGACAGG CGAGGAAATC
TTCTGCGACG AACATGGTCG CGTGCGGGTG AAGTTCAACT GGGACCGTTA TAACCCGGCA
GACCAAGACA GTTCGTGCTG GATCCGTGTG GCACAGGCGT GGGCAGGCAC CGGTTTTGGC
CACCTGGCGA TACCGCGTGT GGGTCAGGAG GTGATTGTAG ACTTCCTCAA CGGCGATCCG
GACCAGCCGA TCATTATGGG GCGCACCTAC CACCAGGAAA ACCGCACCCC CGGCAGCCTG
CCGGGAACAA AGACGCAGAT GACCATCCGC TCCAAAACGT ACATGGGCAG CGGATTTAAT
GAGCTGAAGT TTGATGATGC GACAGGGAGA GAACAGGTCT ACATCCACGC GCAGAAGAAC
ATGGATACCG AAGTGCTCAA CGACCGTACC ACCACCGTAA AACACGATCA CCGCGAAACC
GTAAAAAATG ACCAGACGGT CACGATCCAG GAAGGTAACC GCCTTCTTAC GGTGGAAAAA
GGCCACAAGA TCACCGGAGT ACTGAAAGGG TCTTTATCTG AGGATGTCTT TCAGGACAGA
GGCACGATTG CCGGTTCGGT GCATGTTGAC GCTGTAAACA ATGGTGGCGA AGGCGACGGT
ATACAGGCTT ATACGGCGAT TAAGGAAATT TTGCTGGCTG TGGAGGAAAG CAAAATTGCG
CTGACGCCGG ATGGCATTCA GCTACAGGTC GGGGAATCGA CGGTAATCAG GCTGTCGAAG
GATGGCATCA CCATCGTGGG CGGTTCTGTT TTCATCAACT GA
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| Protein sequence | MSTGLRFTLE VDGLPPDAFA VVSFHLNQSL SSLFSLDLSL VSQQFLSLEF AQVLDKMAYL
TIWQGDEVQR RVKGVVTWFE LGENDKNQML YSMKVHPPLW RAGLRQNFRI FQNEDIKSIL
GTMLQENGVT EWSPLFSEPH PSREFCVQYG ETDYDFLCRM AAEEGIFFYE EHAYKSTDQS
LVLCDTVRHL PESFEIPWNP NTRTEVSTLC ISQFRYSAQI RPSSVVTKDY TFKRPGWAGR
FEQEGQHQDY QRTQYEVYDY PGRFKSAHGQ NFARWQMDGW RNNAETARGM SRSPEIWPGR
RIVLTGHPQA NLNREWQVVA SELHGEQPQA VPGRQGAGTA LENHFAVIPA DRTWRPQPLL
KPLVDGPQSA VVTGPTGEEI FCDEHGRVRV KFNWDRYNPA DQDSSCWIRV AQAWAGTGFG
HLAIPRVGQE VIVDFLNGDP DQPIIMGRTY HQENRTPGSL PGTKTQMTIR SKTYMGSGFN
ELKFDDATGR EQVYIHAQKN MDTEVLNDRT TTVKHDHRET VKNDQTVTIQ EGNRLLTVEK
GHKITGVLKG SLSEDVFQDR GTIAGSVHVD AVNNGGEGDG IQAYTAIKEI LLAVEESKIA
LTPDGIQLQV GESTVIRLSK DGITIVGGSV FIN
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