Gene EcolC_3023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3023 
SymboldcuC 
ID6066017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3301267 
End bp3302652 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content51% 
IMG OID641602439 
ProductC4-dicarboxylate transporter DcuC 
Protein accessionYP_001725974 
Protein GI170021020 
COG category[C] Energy production and conversion 
COG ID[COG3069] C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00771] c4-dicarboxylate anaerobic carrier family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.780031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACAT TCATTGAACT CCTTATTGGG GTTGTGGTTA TTGTGGGTGT AGCTCGCTAC 
ATCATTAAAG GGTATTCCGC CACTGGTGTG TTATTTGTCG GTGGCCTGTT ATTGCTGATT
ATCAGTGCCA TTATGGGGCA CAAAGTGTTA CCGTCCAGCC AGGCTTCAAC AGGCTACAGC
GCCACGGATA TCGTTGAGTA CGTTAAAATA TTGCTAATGA GCCGCGGCGG CGACCTCGGC
ATGATGATTA TGATGCTGTG TGGCTTTGCT GCTTACATGA CCCATATCGG CGCGAATGAT
ATGGTGGTCA AGCTGGCGTC AAAACCATTG CAGTATATTA ACTCCCCCTA CCTGCTGATG
ATTGCCGCCT ATTGTGTTGC CTGTCTGATG TCACTGGCCG TCTCTTCCGC AACCGGTCTG
GGTGTTTTGC TGATGGCAAC CCTGTTTCCG GTGATGGTAA ACGTTGGTAT CAGTCGTGGG
GCAGCAGCTG CCATTTGTGC CTCCCCGGCG GCGATTATTC TCGCACCGAC TTCAGGGGAT
GTGGTGCTGG CGGCGCAGGC TTCCGAAATG TCGCTGATTG ACTTCGCCTT CAAAACGACA
CTGCCTATCT CAATTGCTGC AATTATCGGC ATGGCGATCG CCCACTTCTT CTGGCAACGT
TATCTGGATA AAAAAGAGCA CATCTCTCAT GAAATGTTAG ATGTCAGTGA AATCACTACC
ACTGCCCCTG CGTTTTATGC CATTTTGCCG TTCACGCCGA TCATCGGTGT ACTGATTTTT
GACGGTAAAT GGGGTCCGCA ATTACACATC ATCACTATTC TGGTGATTTG TATGCTGATT
GCCTCCATTC TGGAGTTCCT CCGCAGCTTT AATACCCAGA AAGTTTTCTC TGGTCTGGAA
GTGGCTTATC GCGGGATGGC AGATGCGTTT GCTAACGTGG TGATGCTGCT GGTTGCCGCT
GGGGTATTCG CTCAGGGGCT TAGCACCATC GGCTTTATTC AAAGTCTGAT TTCTATCGCT
ACCTCGTTTG GTTCGGCGAG TATCATCCTG ATGCTGGTAT TGGTGATTCT GACCATGCTG
GCGGCAGTCA CGACCGGTTC AGGCAATGCG CCGTTTTATG CGTTTGTTGA GATGATCCCG
AAACTGGCGC ACTCTTCCGG CATTAACCCG GCGTATTTGA CTATCCCGAT GCTGCAGGCG
TCAAACCTGG GTCGTACCCT ATCACCCGTT TCTGGCGTAG TCGTTGCGGT TGCCGGGATG
GCGAAAATCT CACCATTTGA AGTCGTAAAA CGCACCTCGG TGCCGGTGCT TGTTGGGCTA
GTGATTGTTA TCGTTGCTAC AGAGCTGATG GTGCCAGGAA CGGCAGCAGC GGTCACAGGC
AAGTAA
 
Protein sequence
MLTFIELLIG VVVIVGVARY IIKGYSATGV LFVGGLLLLI ISAIMGHKVL PSSQASTGYS 
ATDIVEYVKI LLMSRGGDLG MMIMMLCGFA AYMTHIGAND MVVKLASKPL QYINSPYLLM
IAAYCVACLM SLAVSSATGL GVLLMATLFP VMVNVGISRG AAAAICASPA AIILAPTSGD
VVLAAQASEM SLIDFAFKTT LPISIAAIIG MAIAHFFWQR YLDKKEHISH EMLDVSEITT
TAPAFYAILP FTPIIGVLIF DGKWGPQLHI ITILVICMLI ASILEFLRSF NTQKVFSGLE
VAYRGMADAF ANVVMLLVAA GVFAQGLSTI GFIQSLISIA TSFGSASIIL MLVLVILTML
AAVTTGSGNA PFYAFVEMIP KLAHSSGINP AYLTIPMLQA SNLGRTLSPV SGVVVAVAGM
AKISPFEVVK RTSVPVLVGL VIVIVATELM VPGTAAAVTG K