Gene EcolC_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3010 
Symbol 
ID6065972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3289017 
End bp3290918 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content53% 
IMG OID641602427 
Productpenicillin-binding protein 2 
Protein accessionYP_001725962 
Protein GI170021008 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000210034 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC AGAACTCTTT TCGCGACTAT ACGGCAGAGT CCGCGCTGTT TGTGCGCCGG 
GCGCTGGTCG CCTTTTTGGG GATTTTGCTG CTGACCGGCG TGCTTATCGC CAACCTGTAT
AATCTGCAAA TTGTTCGCTT TACCGACTAC CAGACCCGCT CTAATGAAAA CCGCATTAAG
CTGGTGCCTA TCGCGCCCAG CCGCGGCATT ATCTACGACC GTAACGGTAT CCCTCTGGCA
CTCAACCGCA CTATCTACCA GATAGAAATG ATGCCGGAGA AAGTCGATAA CGTGCAGCAA
ACGCTGGACG CTTTGCGCAG CGTGGTTGAT CTGACCGATG ACGATATTGC TGCATTCCGA
AAAGAGCGCG CACGTTCACA CCGTTTCACC TCTATTCCGG TGAAAACTAA CCTGACCGAA
GTACAAGTAG CTCGCTTTGC CGTCAATCAG TACCGTTTTC CGGGTGTTGA AGTTAAAGGC
TATAAACGTC GTTACTATCC TTACGGTTCG GCGTTGACCC ACGTCATCGG CTATGTGTCG
AAAATCAACG ATAAAGACGT CGAACGCCTG AATAATGACG GCAAACTGGC CAACTATGCG
GCAACGCATG ATATCGGTAA GCTGGGCATT GAGCGTTACT ATGAAGATGT GCTGCACGGT
CAGACCGGTT ATGAAGAGGT TGAAGTTAAC AACCGTGGGC GTGTTATTCG CCAGTTAAAA
GAAGTACCAC CGCAAGCCGG ACACGATATT TACCTGACGC TGGATCTCAA ACTCCAGCAA
TATATTGAAA CGCTGCTGGC GGGTAGCCGC GCAGCTGTGG TAGTCACCGA TCCGCGTACA
GGTGGGGTGC TGGCGCTGGT TTCCACGCCT AGTTATGACC CAAACTTGTT TGTTGACGGT
ATCTCCAGCA AAGATTATTC CGCCTTGTTG AACGACCCGA ATACACCGCT GGTGAACCGC
GCCACACAGG GGGTTTATCC TCCCGCGTCT ACAGTTAAAC CCTATGTGGC GGTTTCGGCA
TTGAGCGCCG GGGTGATCAC GCGCAATACG ACGCTGTTTG ACCCAGGCTG GTGGCAACTG
CCAGGTTCGG AAAAACGTTA TCGTGACTGG AAAAAATGGG GCCACGGGCG TCTGAATGTC
ACAAGATCGC TGGAAGAATC TGCGGATACC TTCTTCTATC AGGTGGCCTA CGATATGGGG
ATCGATCGCC TCTCCGAATG GATGGGTAAA TTCGGTTATG GTCATTACAC CGGTATCGAC
CTGGCGGAAG AACGTTCCGG CAACATGCCT ACCCGCGAAT GGAAACAGAA ACGCTTTAAA
AAACCGTGGT ATCAGGGTGA CACCATTCCG GTTGGTATCG GTCAGGGTTA CTGGACAGCG
ACCCCAATCC AGATGAGTAA GGCACTGATG ATCCTGATTA ATGACGGTAT CGTGAAGGTT
CCTCATTTGC TGATGAGCAC CGCCGAAGAC GGCAAACAGG TGCCATGGGT ACAGCCGCAT
GAACCGCCCG TCGGCGATAT TCATTCCGGT TACTGGGAGC TGGCGAAAGA CGGTATGTAC
GGTGTTGCTA ACCGCCCTAA CGGTACGGCG CATAAATACT TTGCTAGCGC ACCGTACAAA
ATTGCGGCGA AATCCGGTAC CGCTCAGGTC TTCGGTCTGA AAGCGAACGA AACCTATAAT
GCGCACAAAA TTGCCGAGCG TTTACGTGAC CACAAACTGA TGACCGCCTT TGCGCCATAC
AACAATCCGC AAGTGGCTGT CGCCATGATT CTGGAGAACG GTGGTGCGGG TCCGGCGGTT
GGTACACTGA TGCGCCAGAT CCTCGACCAC ATTATGCTGG GTGATAACAA CACCGATCTG
CCTGCGGAAA ATCCAGCGGT TGCCGCAGCG GAGGACCATT AA
 
Protein sequence
MKLQNSFRDY TAESALFVRR ALVAFLGILL LTGVLIANLY NLQIVRFTDY QTRSNENRIK 
LVPIAPSRGI IYDRNGIPLA LNRTIYQIEM MPEKVDNVQQ TLDALRSVVD LTDDDIAAFR
KERARSHRFT SIPVKTNLTE VQVARFAVNQ YRFPGVEVKG YKRRYYPYGS ALTHVIGYVS
KINDKDVERL NNDGKLANYA ATHDIGKLGI ERYYEDVLHG QTGYEEVEVN NRGRVIRQLK
EVPPQAGHDI YLTLDLKLQQ YIETLLAGSR AAVVVTDPRT GGVLALVSTP SYDPNLFVDG
ISSKDYSALL NDPNTPLVNR ATQGVYPPAS TVKPYVAVSA LSAGVITRNT TLFDPGWWQL
PGSEKRYRDW KKWGHGRLNV TRSLEESADT FFYQVAYDMG IDRLSEWMGK FGYGHYTGID
LAEERSGNMP TREWKQKRFK KPWYQGDTIP VGIGQGYWTA TPIQMSKALM ILINDGIVKV
PHLLMSTAED GKQVPWVQPH EPPVGDIHSG YWELAKDGMY GVANRPNGTA HKYFASAPYK
IAAKSGTAQV FGLKANETYN AHKIAERLRD HKLMTAFAPY NNPQVAVAMI LENGGAGPAV
GTLMRQILDH IMLGDNNTDL PAENPAVAAA EDH