Gene EcolC_2994 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2994 
SymbolrihA 
ID6065891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3272821 
End bp3273756 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content51% 
IMG OID641602411 
Productribonucleoside hydrolase 1 
Protein accessionYP_001725946 
Protein GI170020992 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGC CAATTCTGTT AGATTGCGAC CCAGGTCATG ACGACGCTAT CGCAATAGTT 
CTCGCCCTCG CCTCACCAGA GCTTGATGTC AAAGCAATTA CGTCTTCCGC CGGAAACCAG
ACACCAGAAA AAACCTTACG CAATGTTCTT CGTATGCTGA CCTTGCTCAA TCGCACCGAT
ATTCCGGTAG CAGGCGGCGC GGTAAAACCG TTAATGCGTG AGTTGATTAT CGCGGACAAT
GTGCACGGCG AAAGCGGTCT CGACGGCCCG GCATTACCGG AACCGGCGTT CGCACCGCAA
AACTGTACGG CGGTAGAGCT AATGGCGAAA ACGCTGCGTG AAAGTGCGGA ACCTGTCACC
ATTGTGTCTA CCGGACCGCA AACTAACGTT GCCTTGCTGC TCAATAGCCA TCCGGAACTG
CATAGCAAAA TTGCCCGTAT CGTGATTATG GGCGGCGCAA TGGGGCTTGG TAACTGGACG
CCAGCGGCTG AATTTAATAT TTACGTTGAC CCGGAAGCGG CAGAAATTGT CTTCCAGTCA
GGGATCCCGG TGGTGATGGC CGGTCTGGAT GTTACTCATA AAGCACAAAT CCACGTTGAA
GACACCGAGC GTTTCCGCGC GATTGGTAAC CCTGTTTCAA CCATTGTTGC CGAACTGCTG
GATTTCTTCC TCGAATATCA TAAAGACGAA AAATGGGGCT TTGTCGGCGC ACCACTGCAT
GACCCATGCA CCATCGCCTG GCTGTTGAAA CCGGAGTTAT TTACCTCTGT TGAGCGCTGG
GTTGGCGTGG AAACACAGGG GAAATATACC CAGGGTATGA CGGTTGTTGA TTATTATTAT
CTGACAGGCA ATAAACCGAA TGCCACCGTA ATGGTCGATG TTGATCGTCA GGGCTTTGTT
GATTTACTGG CTGATCGTCT GAAATTTTAC GCTTAA
 
Protein sequence
MALPILLDCD PGHDDAIAIV LALASPELDV KAITSSAGNQ TPEKTLRNVL RMLTLLNRTD 
IPVAGGAVKP LMRELIIADN VHGESGLDGP ALPEPAFAPQ NCTAVELMAK TLRESAEPVT
IVSTGPQTNV ALLLNSHPEL HSKIARIVIM GGAMGLGNWT PAAEFNIYVD PEAAEIVFQS
GIPVVMAGLD VTHKAQIHVE DTERFRAIGN PVSTIVAELL DFFLEYHKDE KWGFVGAPLH
DPCTIAWLLK PELFTSVERW VGVETQGKYT QGMTVVDYYY LTGNKPNATV MVDVDRQGFV
DLLADRLKFY A