| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2982 |
|---|
| Symbol | asnB |
|---|
| ID | 6065771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3257193 |
|---|
| End bp | 3258857 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641602392 |
|---|
| Product | asparagine synthetase B |
|---|
| Protein accession | YP_001725934 |
|---|
| Protein GI | 170020980 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.000000271293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTTCAA TTTTTGGCGT ATTCGATATC AAAACAGACG CAGTTGAGCT GCGTAAGAAA
GCACTCGAGC TGTCACGCCT GATGCGTCAT CGTGGCCCGG ACTGGTCCGG TATTTATGCC
AGCGATAACG CCATTCTCGC CCACGAACGT CTGTCAATTG TTGACGTTAA CGCGGGGGCG
CAACCTCTCT ACAACCAACA AAAAACTCAT GTGCTGGCGG TAAACGGTGA AATCTACAAC
CACCAGGCAC TGCGCGCCGA ATATGGCGAT CGTTATCAGT TCCAGACCGG ATCTGACTGT
GAAGTGATCC TCGCGCTGTA TCAGGAAAAA GGGCCGGAAT TTCTCGACGA CTTGCAGGGC
ATGTTTGCCT TTGCCTTGTA CGACAGCGAA AAAGATGCCT ACCTGATTGG TCGCGACCAT
CTGGGGATCA TCCCACTGTA TATGGGCTAT GACGAACACG GTCAGCTGTA TGTGGCCTCA
GAAATGAAAG CCCTGGTGCC AGTTTGCCGC ACGATTAAAG AGTTCCCGGC GGGGAGCTAT
TTGTGGAGCC AGGACGGCGA AATCCGTTCT TATTATCATC GCGACTGGTT CGACTACGAT
GCGGTGAAAG ATAACGTAAC CGACAAAAAC GAGCTGCGTC AGGCACTTGA AGATTCCGTT
AAAAGCCATC TGATGTCTGA TGTGCCTTAC GGTGTGCTGC TTTCTGGTGG TCTGGATTCC
TCAATTATTT CCGCTATCAC CAAGAAATAC GCAGCCCGTC GCGTGGAAGA TCAGGAACGC
TCTGAAGCCT GGTGGCCGCA GTTACACTCC TTTGCTGTAG GTCTGCCGGG TTCACCGGAT
CTTAAAGCAG CCCAGGAAGT GGCAAACCAT CTGGGCACGG TGCATCACGA AATTCACTTC
ACTGTACAGG AAGGTCTGGA TGCCATCCGC GACGTGATTT ACCACATCGA AACTTATGAT
GTGACCACAA TTCGCGCTTC AACACCGATG TATTTAATGT CGCGTAAGAT CAAGGCGATG
GGCATTAAAA TGGTGCTGTC CGGTGAAGGT TCTGATGAAG TGTTTGGCGG TTATCTTTAC
TTCCATAAAG CGCCCAACGC TAAAGAACTG CATGAAGAGA CGGTGCGTAA ACTGCTGGCC
CTGCATATGT ATGACTGCGC GCGCGCCAAC AAAGCGATGT CAGCCTGGGG CGTGGAAGCA
CGCGTTCCGT TCCTCGACAA AAAATTCCTT GATGTGGCGA TGCGCATTAA CCCGCAGGAT
AAAATGTGCG GTAACGGCAA AATGGAAAAA CACATCCTGC GTGAATGTTT TGAGTCATAC
CTGCCCGCAA GCGTGGCCTG GCGGCAGAAA GAGCAGTTCT CCGATGGCGT CGGTTACAGT
TGGATCGACA CCCTGAAAGA AGTGGCGGCG CAGCAGGTTT CTGATCAGCA ACTGGAAACT
GCCCGCTTCC GCTTCCCGTA CAACACGCCA ACCTCAAAAG AAGCGTATCT GTACCGGGAG
ATCTTTGAAG AACTGTTCCC GCTTCCGAGC GCCGCTGAGT GCGTGCCTGG CGGTCCTTCC
GTCGCGTGTT CTTCCGCTAA AGCGATCGAA TGGGATGAAG CGTTCAAGAA AATGGACGAT
CCATCTGGTC GTGCGGTTGG TGTTCACCAG TCGGCATATA AGTAA
|
|---|
| Protein sequence | MCSIFGVFDI KTDAVELRKK ALELSRLMRH RGPDWSGIYA SDNAILAHER LSIVDVNAGA
QPLYNQQKTH VLAVNGEIYN HQALRAEYGD RYQFQTGSDC EVILALYQEK GPEFLDDLQG
MFAFALYDSE KDAYLIGRDH LGIIPLYMGY DEHGQLYVAS EMKALVPVCR TIKEFPAGSY
LWSQDGEIRS YYHRDWFDYD AVKDNVTDKN ELRQALEDSV KSHLMSDVPY GVLLSGGLDS
SIISAITKKY AARRVEDQER SEAWWPQLHS FAVGLPGSPD LKAAQEVANH LGTVHHEIHF
TVQEGLDAIR DVIYHIETYD VTTIRASTPM YLMSRKIKAM GIKMVLSGEG SDEVFGGYLY
FHKAPNAKEL HEETVRKLLA LHMYDCARAN KAMSAWGVEA RVPFLDKKFL DVAMRINPQD
KMCGNGKMEK HILRECFESY LPASVAWRQK EQFSDGVGYS WIDTLKEVAA QQVSDQQLET
ARFRFPYNTP TSKEAYLYRE IFEELFPLPS AAECVPGGPS VACSSAKAIE WDEAFKKMDD
PSGRAVGVHQ SAYK
|
|---|
| |