Gene EcolC_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2950 
Symbol 
ID6064758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3217156 
End bp3218292 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content42% 
IMG OID641602362 
Producttransposase IS4 family protein 
Protein accessionYP_001725904 
Protein GI170020950 
COG category[L] Replication, recombination and repair 
COG ID[COG5433] Transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.179437 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTTA AAAAACTGAT GGAACATATT TCTATTATCC CCGATTACAG ACAAGCCTGG 
AAAGTAGAAC ATAAATTGTC AGATATTCTA CTGTTGACTA TTTGTGCCGT TATTTCTGGT
GCAGAGGGTT GGGAAGATAT AGAGGATTTT GGGGAAACAC ATCTCGATTT TTTGAAGCAA
TATGGTGATT TTGAAAATGG TATTCCTGTT CACGATACCA TTGCCAGAGT TGTATCCTGT
ATCAGTCCTG CAAAATTTCA CGAGTGCTTT ATTAACTGGA TGCGTGACTG CCATTCTTCA
GATGATAAAG ACGTCATTGC AATTGATGGA AAAACGCTCC GGCACTCTTA TGACAAGAGT
CGCCGCAGGG GAGCGATTCA TGTCATTAGT GCGTTCTCAA CAATGCACAG TCTGGTCATC
GGACAGATCA AGACGGATGA GAAATCTAAT GAGATTACAG CCATTCCTGA ACTTCTTAAC
ATGCTGGATA TTAAAGGAAA AATCATCACA ACTGATGCGA TGGGATGCCA GAAAGATATT
GCAGAGAAGA TACAAAAACA GGGCGGTGAT TATTTATTCG CTGTAAAAGG AAACCAGGGG
CGGCTTAATA AAGCCTTTGA GGAAAAATTT CCGCTGAAAG AATTAAATAA TCCAGAGCAT
GACAGTTACG CAATGAGTGA AAAGAGTCAC GGCAGAGAAG AAATCCGTCT TCATATTGTT
TGCGATGTCC CTGATGAACT TATTGATTTC ACGTTTGAAT GGAAAGGACT GAAGAAATTA
TGCGTGGCAG TCTCCTTTCG GTCAATAATA GCAGAACAAA AGAAAGAGCC AGAAATGACG
GTCAGATATT ATATCAGTTC TGCTGATTTA ACCGCAGAAA AGTTCGCCAC AGCAATCCGA
AACCACTGGC ACGTGGAGAA TAAGCTGCAC TGGCGTCTGG ACGTGGTAAT GAATGAAGAC
GACTGCAAAA TAAGAAGAGG AAACGCCGCA GAATTATTTT CAGGGATACG GCACATCGCT
ATTAATATTT TAACGAATGA TAAGGTATTC AAGGCAGGGT TAAGACGTAA GATGCGAAAA
GCAGCCATGG ATAGAAACTA TCTCGCGTCA GTCCTTGCGG GGAGCGGGCT TTCGTAA
 
Protein sequence
MELKKLMEHI SIIPDYRQAW KVEHKLSDIL LLTICAVISG AEGWEDIEDF GETHLDFLKQ 
YGDFENGIPV HDTIARVVSC ISPAKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS
RRRGAIHVIS AFSTMHSLVI GQIKTDEKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI
AEKIQKQGGD YLFAVKGNQG RLNKAFEEKF PLKELNNPEH DSYAMSEKSH GREEIRLHIV
CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKEPEMT VRYYISSADL TAEKFATAIR
NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMRK
AAMDRNYLAS VLAGSGLS