Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2942 |
Symbol | |
ID | 6065582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3209326 |
End bp | 3210060 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641602354 |
Product | LamB/YcsF family protein |
Protein accession | YP_001725896 |
Protein GI | 170020942 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATTG ACCTGAACGC CGATCTGGGC GAAGGCTGCG CCAGCGACGC AGAGCTATTA ACGCTGGTTT CCTCTGCCAA TATTGCTTGT GGATTTCATG CAGGCGATGC CCAAACCATG CAGGCTTGCG TGCGTGAAGC AATAAAAAAT GGTGTCGCGA TTGGCGCTCA CCCGAGTTTT CCCGACAGGG AAAATTTTGG TCGCAGCGCC ATGCAGCTGC CGCCAGAAAC CGTTTACGCC CAGACGCTGT ATCAAATTGG CGCGCTGGCA ACGATTGCCC GTGCGCAAGG CGGCGTAATG CGTCATGTCA AACCGCACGG CATGTTGTAC AACCAGGCGG CGAAAGAAGC ACAACTGGCA GACGCCATCG CCAGAGCGGT ATACGCTTGC GATCCGGCAT TGATTCTCGT TGGGCTGGCA GGAAGCGAGC TGATTCGTGC AGGCAAGCAA TATGGCCTGA CAACGCGCGA GGAAGTGTTT GCCGATCGCG GTTATCAGGC TGACGGCTCG CTGGTGCCGC GAAGTCAGCC AGGCGCGTTG ATTGAAAACG AAGAACAGGC GCTGGCGCAA ACGCTAGAGA TGGTGCAACA CGGCAGAGTC AAAAGTATCA CCGGCGAATG GGCAACGGTC ACGGCGCAAA CAGTCTGCCT GCATGGCGAC GGCGAGCACG CACTGGCGTT CGCCCGCCGA CTACGCTCTA CATTTGCCGA AAAGGAGATT GTTGTCGCAG CATAA
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Protein sequence | MKIDLNADLG EGCASDAELL TLVSSANIAC GFHAGDAQTM QACVREAIKN GVAIGAHPSF PDRENFGRSA MQLPPETVYA QTLYQIGALA TIARAQGGVM RHVKPHGMLY NQAAKEAQLA DAIARAVYAC DPALILVGLA GSELIRAGKQ YGLTTREEVF ADRGYQADGS LVPRSQPGAL IENEEQALAQ TLEMVQHGRV KSITGEWATV TAQTVCLHGD GEHALAFARR LRSTFAEKEI VVAA
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