Gene EcolC_2942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2942 
Symbol 
ID6065582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3209326 
End bp3210060 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content57% 
IMG OID641602354 
ProductLamB/YcsF family protein 
Protein accessionYP_001725896 
Protein GI170020942 
COG category[R] General function prediction only 
COG ID[COG1540] Uncharacterized proteins, homologs of lactam utilization protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG ACCTGAACGC CGATCTGGGC GAAGGCTGCG CCAGCGACGC AGAGCTATTA 
ACGCTGGTTT CCTCTGCCAA TATTGCTTGT GGATTTCATG CAGGCGATGC CCAAACCATG
CAGGCTTGCG TGCGTGAAGC AATAAAAAAT GGTGTCGCGA TTGGCGCTCA CCCGAGTTTT
CCCGACAGGG AAAATTTTGG TCGCAGCGCC ATGCAGCTGC CGCCAGAAAC CGTTTACGCC
CAGACGCTGT ATCAAATTGG CGCGCTGGCA ACGATTGCCC GTGCGCAAGG CGGCGTAATG
CGTCATGTCA AACCGCACGG CATGTTGTAC AACCAGGCGG CGAAAGAAGC ACAACTGGCA
GACGCCATCG CCAGAGCGGT ATACGCTTGC GATCCGGCAT TGATTCTCGT TGGGCTGGCA
GGAAGCGAGC TGATTCGTGC AGGCAAGCAA TATGGCCTGA CAACGCGCGA GGAAGTGTTT
GCCGATCGCG GTTATCAGGC TGACGGCTCG CTGGTGCCGC GAAGTCAGCC AGGCGCGTTG
ATTGAAAACG AAGAACAGGC GCTGGCGCAA ACGCTAGAGA TGGTGCAACA CGGCAGAGTC
AAAAGTATCA CCGGCGAATG GGCAACGGTC ACGGCGCAAA CAGTCTGCCT GCATGGCGAC
GGCGAGCACG CACTGGCGTT CGCCCGCCGA CTACGCTCTA CATTTGCCGA AAAGGAGATT
GTTGTCGCAG CATAA
 
Protein sequence
MKIDLNADLG EGCASDAELL TLVSSANIAC GFHAGDAQTM QACVREAIKN GVAIGAHPSF 
PDRENFGRSA MQLPPETVYA QTLYQIGALA TIARAQGGVM RHVKPHGMLY NQAAKEAQLA
DAIARAVYAC DPALILVGLA GSELIRAGKQ YGLTTREEVF ADRGYQADGS LVPRSQPGAL
IENEEQALAQ TLEMVQHGRV KSITGEWATV TAQTVCLHGD GEHALAFARR LRSTFAEKEI
VVAA