| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2930 |
|---|
| Symbol | sucA |
|---|
| ID | 6065526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3193813 |
|---|
| End bp | 3196614 |
|---|
| Gene Length | 2802 bp |
|---|
| Protein Length | 933 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641602342 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_001725884 |
|---|
| Protein GI | 170020930 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAACA GCGCTTTGAA AGCCTGGTTG GACTCTTCTT ACCTCTCTGG CGCAAACCAG
AGCTGGATAG AACAGCTCTA TGAAGACTTC TTAACCGATC CTGACTCGGT TGACGCTAAC
TGGCGTTCGA CGTTCCAGCA GTTACCTGGT ACGGGAGTCA AACCGGATCA ATTCCACTCT
CAAACGCGTG AATATTTCCG CCGCCTGGCG AAAGACGCTT CACGTTACTC TTCAACGATC
TCCGACCCTG ACACCAATGT GAAGCAGGTA AAAGTCCTGC AGCTCATTAA CGCATACCGC
TTCCGTGGTC ACCAGCATGC GAATCTCGAT CCGCTGGGAC TGTGGCAGCA AGATAAAGTG
GCCGATCTGG ATCCGTCTTT CCACGATCTG ACCGAAGCAG ACTTCCAGGA GACCTTCAAC
GTCGGTTCAT TTGCCAGCGG CAAAGAAACC ATGAAACTCG GCGAGCTGCT GGAAGCCCTC
AAGCAAACCT ACTGCGGCCC GATTGGTGCC GAGTATATGC ACATCACCAG CACCGAAGAA
AAACGCTGGA TCCAACAGCG TATCGAGTCT GGTCGCGCGA CTTTCAATAG CGAAGAGAAA
AAACGCTTCT TAAGCGAACT GACCGCCGCT GAAGGCCTTG AACGTTACCT CGGCGCAAAA
TTCCCTGGCG CAAAACGCTT CTCGCTGGAA GGCGGTGACG CGTTAATCCC GATGCTTAAA
GAGATGATCC GCCACGCTGG CAACAGCGGC ACCCGCGAAG TGGTTCTCGG GATGGCGCAC
CGTGGTCGTC TGAACGTGCT GGTGAACGTG CTGGGTAAAA AACCGCAAGA CTTGTTCGAC
GAGTTCGCCG GTAAACATAA AGAACACCTC GGCACGGGTG ACGTGAAATA CCACATGGGC
TTCTCGTCTG ACTTCCAGAC CGATGGCGGC CTGGTGCACC TGGCGCTGGC GTTTAACCCG
TCTCACCTTG AGATTGTAAG CCCGGTAGTT ATCGGTTCTG TTCGTGCCCG TCTGGACAGA
CTTGATGAGC CGAGCAGCAA CAAAGTGCTG CCAATCACCA TCCACGGTGA CGCCGCAGTG
ACCGGGCAGG GTGTGGTTCA GGAAACTCTG AACATGTCGA AAGCGCGTGG TTATGAAGTT
GGCGGTACGG TACGTATCGT TATCAACAAC CAGGTTGGTT TCACCACCTC TAATCCGCTG
GATGCTCGTT CTACACCGTA CTGTACTGAT ATCGGTAAGA TGGTTCAGGC ACCGATTTTC
CACGTTAACG CGGATGATCC GGAAGCCGTT GCCTTTGTGA CCCGTCTGGC GCTCGATTTC
CGTAACACCT TTAAACGTGA TGTCTTCATC GACCTGGTGT GCTACCGCCG TCACGGCCAC
AACGAAGCCG ACGAGCCGAG CGCAACCCAG CCGCTGATGT ATCAGAAAAT CAAAAAACAT
CCGACGCCGC GCAAAATCTA TGCTGACAAG CTGGAGCAGG AAAAAGTGGC GACGCTGGAA
GATGCCACCG AGATGGTTAA CCTGTACCGC GATGCGCTGG ATGCTGGCGA TTGCGTAGTG
GCAGAGTGGC GTCCGATGAA CATGCACTCT TTCACCTGGT CGCCGTATCT CAACCACGAA
TGGGACGAAG AGTACCCGAA CAAAGTTGAG ATGAAGCGCC TGCAGGAACT GGCTAAACGC
ATCAGCACGG TGCCGGAAGC GGTTGAAATG CAGTCTCGCG TTGCCAAAAT TTATGGCGAT
CGCCAGGCGA TGGCTGCCGG TGAGAAACTG TTCGACTGGG GCGGCGCGGA AAACCTCGCT
TACGCCACGC TGGTTGACGA AGGCATTCCG GTTCGCCTGT CGGGTGAAGA CTCCGGTCGC
GGTACCTTCT TCCACCGCCA CGCGGTGATC CACAACCAGT CTAACGGTTC CACTTACACG
CCGCTGCAAC ACATCCATAA CGGCCAGGGC GCGTTCCGTG TCTGGGACTC CGTACTGTCT
GAAGAAGCAG TGCTGGCGTT TGAATACGGT TATGCCACCG CAGAACCACG CACTCTGACT
ATCTGGGAAG CGCAGTTCGG TGACTTCGCC AACGGTGCGC AGGTGGTTAT CGACCAGTTC
ATCTCCTCTG GCGAACAGAA ATGGGGCCGG ATGTGTGGTC TGGTGATGTT GCTGCCGCAC
GGTTATGAAG GGCAGGGGCC GGAGCACTCC TCCGCGCGTC TGGAACGTTA TCTGCAACTT
TGTGCTGAGC AAAACATGCA GGTGTGCGTA CCGTCTACCC CGGCACAGGT TTACCACATG
CTGCGTCGTC AGGCGCTGCG CGGGATGCGT CGTCCGCTGG TCGTGATGTC GCCGAAATCC
CTGCTGCGTC ATCCGCTGGC GGTTTCCAGC CTCGAAGAAC TGGCGAACGG CACCTTCCTG
CCAGCCATCG GTGAAATCGA CGAGCTTGAT CCGAAGGGTG TGAAGCGCGT AGTGATGTGT
TCTGGTAAGG TTTATTACGA CCTGCTGGAA CAACGTCGTA AGAACAATCA ACACGATGTC
GCCATTGTGC GTATCGAGCA ACTCTACCCG TTCCCGCATA AAGCGATGCA GGAAGTGTTG
CAGCAGTTTG CTCACGTCAA GGATTTTGTC TGGTGCCAGG AAGAGCCGCT CAACCAGGGC
GCATGGTACT GCAGCCAGCA TCATTTCCGT GAAGTGATTC CGTTTGGGGC TTCTCTGCGT
TATGCAGGCC GCCCGGCCTC CGCCTCTCCG GCGGTAGGGT ATATGTCCGT TCACCAGAAA
CAGCAACAAG ATCTGGTTAA TGACGCGCTG AACGTCGAAT AA
|
|---|
| Protein sequence | MQNSALKAWL DSSYLSGANQ SWIEQLYEDF LTDPDSVDAN WRSTFQQLPG TGVKPDQFHS
QTREYFRRLA KDASRYSSTI SDPDTNVKQV KVLQLINAYR FRGHQHANLD PLGLWQQDKV
ADLDPSFHDL TEADFQETFN VGSFASGKET MKLGELLEAL KQTYCGPIGA EYMHITSTEE
KRWIQQRIES GRATFNSEEK KRFLSELTAA EGLERYLGAK FPGAKRFSLE GGDALIPMLK
EMIRHAGNSG TREVVLGMAH RGRLNVLVNV LGKKPQDLFD EFAGKHKEHL GTGDVKYHMG
FSSDFQTDGG LVHLALAFNP SHLEIVSPVV IGSVRARLDR LDEPSSNKVL PITIHGDAAV
TGQGVVQETL NMSKARGYEV GGTVRIVINN QVGFTTSNPL DARSTPYCTD IGKMVQAPIF
HVNADDPEAV AFVTRLALDF RNTFKRDVFI DLVCYRRHGH NEADEPSATQ PLMYQKIKKH
PTPRKIYADK LEQEKVATLE DATEMVNLYR DALDAGDCVV AEWRPMNMHS FTWSPYLNHE
WDEEYPNKVE MKRLQELAKR ISTVPEAVEM QSRVAKIYGD RQAMAAGEKL FDWGGAENLA
YATLVDEGIP VRLSGEDSGR GTFFHRHAVI HNQSNGSTYT PLQHIHNGQG AFRVWDSVLS
EEAVLAFEYG YATAEPRTLT IWEAQFGDFA NGAQVVIDQF ISSGEQKWGR MCGLVMLLPH
GYEGQGPEHS SARLERYLQL CAEQNMQVCV PSTPAQVYHM LRRQALRGMR RPLVVMSPKS
LLRHPLAVSS LEELANGTFL PAIGEIDELD PKGVKRVVMC SGKVYYDLLE QRRKNNQHDV
AIVRIEQLYP FPHKAMQEVL QQFAHVKDFV WCQEEPLNQG AWYCSQHHFR EVIPFGASLR
YAGRPASASP AVGYMSVHQK QQQDLVNDAL NVE
|
|---|
| |