Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2894 |
Symbol | |
ID | 6065357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3154992 |
End bp | 3155945 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641602299 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001725848 |
Protein GI | 170020894 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0369741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.204254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCATG AATTATCAAG TATGAAGGCA TTTGTCATAC TGGCAGAGTC CAGTTCGTTT AACAATGCCG CTAAATTACT CAATATTACG CAACCTGCAT TAACGCGAAG AATAAAAAAG ATGGAGGAAG ATTTACATAT TCAACTATTT GAGCGTACAA CTCGCAAGGT TACGTTAACA AAAGCAGGAA AAAGGTTGCT CCCGGAGGCG CGGGAATTAA TAAAGAAATT CGATGAAACG CTTTTTAATA TTCGTGATAT GAATGCTTAT CATCGTGGTA TGGTGACGTT AGCGTGTATT CCGACCGCAG TATTTTATTT TTTACCGCTG GCAATCGGTA AATTTAATGA GCTGTATCCC AATATTAAAG TGCGGATTCT GGAACAAGGC ACGAATAATT GCATGGAATC GGTGCTGTGT AACGAATCAG ACTTTGGCAT AAACATGAAC AACGTCACAA ATTCATCCAT TGATTTTACC CCACTGGTCA ACGAGCCGTT CGTGCTGGCC TGTCGGCGTG ACCATCCATT GGCCAAAAAG CAGCTTGTAG AATGGCAGGA GTTAGTGGGT TACAAAATGA TTGGCGTACG CTCCTCCAGC GGCAACCGAC TGTTGATAGA ACAACAGCTG GCCGACAAGC CCTGGAAGCT GGACTGGTTT TACGAAGTGC GTCATCTTTC GACGTCATTA GGACTGGTGG AGGCGGGACT GGGGATTTCG GCGCTTCCTG GCCTGGCAAT GCCTCATGCG CCCTATTCTT CGATTATTGG TATCCCATTG GTGGAACCCG TTATACGTCG AACATTGGGA ATAATTCGCC GTAAAGATGC CGTACTTTCT CCAGCAGCAG AACGCTTTTT TGCCTTGCTG ATTAATTTAT GGACTGACGA TAAAGACAAT TTGTGGACCA ATATCGTCGA ACGCCAGAGA CACGCGTTAC AGGAGATAGG TTAA
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Protein sequence | MKHELSSMKA FVILAESSSF NNAAKLLNIT QPALTRRIKK MEEDLHIQLF ERTTRKVTLT KAGKRLLPEA RELIKKFDET LFNIRDMNAY HRGMVTLACI PTAVFYFLPL AIGKFNELYP NIKVRILEQG TNNCMESVLC NESDFGINMN NVTNSSIDFT PLVNEPFVLA CRRDHPLAKK QLVEWQELVG YKMIGVRSSS GNRLLIEQQL ADKPWKLDWF YEVRHLSTSL GLVEAGLGIS ALPGLAMPHA PYSSIIGIPL VEPVIRRTLG IIRRKDAVLS PAAERFFALL INLWTDDKDN LWTNIVERQR HALQEIG
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