| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2889 |
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| Symbol | |
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| ID | 6065335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 3147081 |
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| End bp | 3148151 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641602294 |
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| Product | lambda integrase |
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| Protein accession | YP_001725843 |
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| Protein GI | 170020889 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00939202 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0727877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAAGAA GGCGAAGTCA TGAGCGCCGG GATTTACCCC CTAACCTTTA TATAAGAAAC
AATGGATATT ACTGCTACAG GGACCCAAGG ACGGGTAAAG AGTTTGGATT AGGCCGAGAC
AGGCGAATCG CAATCACTGA AGCTATACAG GCCAACATTG AGTTATTTTC AGGACACAAA
CACAAGCCTC TGACAGCGAG AATCAACAGT GATAATTCCG TTACGTTACA TTCATGGCTT
GATCGCTACG AAAAAATCCT GGCCAGCAGA GGAATCAAGC AGAAGACACT CATAAATTAC
ATGAGCAAAA TTAAAGCAAT AAGGAGGGGT CTGCCTGATG CTCCACTTGA AGACATCACC
ACAAAAGAAA TTGCGGCAAT GCTCAATGGA TACATAGACG AGGGAAAGGC GGCATCAGCC
AAGTTAATCA GATCAACACT GAGCGATGCA TTCCGAGAGG CTATGGCTGA AGGCCATATA
ACAACAAACC CGGTCGCAGC CACTCGCGCT GCAAAATCAG AGGTAAGGAG ATCAAGACTT
ACGGCTGACG AATACCTGAA AATTTATCAA GCAGCAGAAT CATCACCATG TTGGCTTAGA
CTTGCAATGG AACTGGCTGT TGTTACCGGG CAGCGAGTTG GTGATTTATG CGAAATGAAG
TGGTCTGATA TCGTAGATGG ATATCTTTAT GTCGAGCAAA GCAAAACAGG CGTAAAAATT
GCCATCCCAA CAACATTGCA TGTTGATGCT CTCGGGATAT CAATGAAGGA AACACTTGAT
AAATGCAAAA AGATTCTTGG CGGAGAAACC ATAATTGCAT CTACTCGTCG TGAACCGCTT
TCATCCGGCA CAGTATCAAG GTATTTTATG CGCGCACGAA AAGCATCAGG TCTCTCCTTC
GAAGGGGATC CGCCAACCTT TCACGAGTTG CGCAGTTTGT CTGCAAGACT CTATGAGAAG
CAGATAAGCG ATAAATTTGC TCAACATCTT CTCGGGCATA AGTCGGACAC CATGGCATCA
CAGTATCGTG ATGACAGAGG CAGGGAGTGG GACAAAATTG AAATCAAATA A
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| Protein sequence | MGRRRSHERR DLPPNLYIRN NGYYCYRDPR TGKEFGLGRD RRIAITEAIQ ANIELFSGHK
HKPLTARINS DNSVTLHSWL DRYEKILASR GIKQKTLINY MSKIKAIRRG LPDAPLEDIT
TKEIAAMLNG YIDEGKAASA KLIRSTLSDA FREAMAEGHI TTNPVAATRA AKSEVRRSRL
TADEYLKIYQ AAESSPCWLR LAMELAVVTG QRVGDLCEMK WSDIVDGYLY VEQSKTGVKI
AIPTTLHVDA LGISMKETLD KCKKILGGET IIASTRREPL SSGTVSRYFM RARKASGLSF
EGDPPTFHEL RSLSARLYEK QISDKFAQHL LGHKSDTMAS QYRDDRGREW DKIEIK
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