Gene EcolC_2850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2850 
Symbol 
ID6065169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3119148 
End bp3120281 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content55% 
IMG OID641602256 
ProductABC-2 type transporter 
Protein accessionYP_001725805 
Protein GI170020851 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0149412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACC CGATCCTGTC CTGGCGTCGC GTACGGGCGC TGTGCGTTAA AGAGACGCGG 
CAGATCGTTC GCGATCCGAG TAGCTGGCTG ATTGCGGTAG TGATCCCGCT GCTACTGCTG
TTTATTTTTG GTTACGGCAT TAACCTCGAC TCCAGCAAGC TGCGGGTCGG GATTTTACTG
GAACAGCGTA GCGAAGCGGC GCTGGATTTC ACCCACACCA TGACCGGTTC GCCCTACATC
GACGCCACCA TCAGCGATAA CCGTCAGGAA CTGATCGCCA AAATGCAGGC GGGGAAAATT
CGCGGTCTGG TGGTTATTCC GGTGGATTTT GCGGAACAGA TGGAGCGCGC CAACGCCACC
GCACCGATTC AGGTGATCAC CGACGGCAGT GAGCCGAATA CCGCTAACTT TGTACAGGGG
TATGTCGAAG GGATCTGGCA GATCTGGCAA ATGCAGCGAG CGGAGGACAA CGGGCAGACT
TTTGAACCGC TTATTGATGT ACAAACCCGC TACTGGTTTA ACCCGGCGGC GATTAGCCAG
CACTTCATTA TCCCCGGTGC GGTGACCATT ATCATGACGG TCATCGGCGC GATTCTCACC
TCGCTGGTGG TGGCGCGAGA ATGGGAACGC GGCACCATGG AGGCTCTGCT CTCTACGGAG
ATTACCCGCA CGGAACTGCT GCTGTGTAAG CTGATCCCTT ATTACTTTCT CGGGATGCTG
GCGATGTTGC TGTGTATGCT GGTGTCAGTG TTTATTCTCG GCGTGCCGTA TCGCGGGTCG
CTGCTGATTC TGTTTTTTAT CTCCAGCCTG TTTTTACTCA GTACCCTGGG GATGGGGCTG
CTGATTTCCA CGATTACCCG CAACCAGTTC AATGCCGCTC AGGTCGCCCT GAACGCCGCT
TTTCTGCCGT CGATTATGCT TTCCGGCTTT ATTTTTCAGA TCGACAGTAT GCCCGCGGTG
ATCCGCGCGG TGACGTACAT TATTCCCGCT CGTTATTTCG TCAGCACCCT GCAAAGCCTG
TTCCTCGCCG GGAATATTCC AGTGGTGCTG GTGGTAAACG TGCTGTTTTT GATCGCTTCG
GCGGTGATGT TTATCGGCCT GACGTGGCTG AAAACCAAAC GTCGGCTGGA TTAG
 
Protein sequence
MSNPILSWRR VRALCVKETR QIVRDPSSWL IAVVIPLLLL FIFGYGINLD SSKLRVGILL 
EQRSEAALDF THTMTGSPYI DATISDNRQE LIAKMQAGKI RGLVVIPVDF AEQMERANAT
APIQVITDGS EPNTANFVQG YVEGIWQIWQ MQRAEDNGQT FEPLIDVQTR YWFNPAAISQ
HFIIPGAVTI IMTVIGAILT SLVVAREWER GTMEALLSTE ITRTELLLCK LIPYYFLGML
AMLLCMLVSV FILGVPYRGS LLILFFISSL FLLSTLGMGL LISTITRNQF NAAQVALNAA
FLPSIMLSGF IFQIDSMPAV IRAVTYIIPA RYFVSTLQSL FLAGNIPVVL VVNVLFLIAS
AVMFIGLTWL KTKRRLD