| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2846 |
|---|
| Symbol | |
|---|
| ID | 6065153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 3114164 |
|---|
| End bp | 3115528 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641602252 |
|---|
| Product | ATP-dependent RNA helicase RhlE |
|---|
| Protein accession | YP_001725801 |
|---|
| Protein GI | 170020847 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0376153 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTCG ATTCTTTGGG TTTAAGCCCT GATATCCTGC GCGCCGTTGC CGAGCAGGGT
TACCGTGAAC CCACCCCTAT TCAGCAGCAG GCGATCCCTG CGGTGCTGGA AGGCCGCGAC
CTGATGGCTA GCGCCCAGAC CGGCACCGGC AAAACAGCGG GCTTTACGCT GCCGCTGTTG
CAACACCTGA TCACTCGCCA GCCGCACGCC AAAGGGCGTC GTCCGGTACG TGCGCTCATT
CTTACCCCGA CCCGTGAACT GGCGGCGCAG ATTGGCGAAA ACGTCCGTGA TTACAGCAAA
TACCTGAACA TTCGTTCGCT GGTGGTGTTT GGTGGTGTGA GTATTAACCC GCAGATGATG
AAACTGCGTG GCGGCGTTGA TGTGCTGGTG GCAACCCCGG GACGTTTGCT GGACCTGGAA
CATCAGAATG CAGTGAAGCT GGATCAGGTT GAAATCCTCG TCCTCGATGA AGCTGACCGC
ATGCTCGACA TGGGCTTTAT CCACGATATC CGTCGCGTGT TAACAAAACT ACCTGCGAAG
CGCCAGAACC TGTTATTCTC CGCGACCTTC TCTGACGATA TTAAAGCCCT GGCGGAAAAA
CTGTTGCACA ACCCGCTGGA AATCGAAGTG GCACGCCGCA ATACCGCGTC TGATCAGGTG
ACCCAGCACG TTCACTTTGT CGATAAGAAA CGCAAACGCG AATTGCTGTC GCACATGATT
GGGAAAGGGA ACTGGCAGCA GGTGCTGGTG TTTACCCGTA CCAAACACGG CGCTAACCAT
CTGGCTGAAC AGCTCAATAA AGATGGCATC CGTAGTGCGG CGATCCACGG CAATAAATCG
CAAGGTGCGC GTACTCGTGC GCTGGCTGAT TTTAAATCGG GCGATATTCG TGTACTGGTG
GCAACTGACA TCGCTGCGCG CGGCCTGGAT ATTGAAGAGC TGCCGCACGT CGTCAACTAT
GAACTGCCAA ACGTACCTGA AGATTATGTC CACCGTATCG GGCGTACCGG TCGTGCGGCT
GCTACCGGTG AAGCGTTGTC GCTGGTGTGT GTTGATGAAC ACAAACTGCT GCGTGATATC
GAAAAACTGC TGAAAAAAGA GATCCCGCGC ATTGCGATTC CGGGCTATGA GCCGGACCCG
TCAATCAAAG CCGAACCGAT CCAGAACGGT CGCCAGCAAC GTGGCGGCGG CGGTCGTGGG
CAAGGTGGTG GTCGCGGTCA ACAGCAACCA CGCCGTGGGG AAGGTGGCGC AAAATCTGCA
AGCGCGAAAC CTGCAGAAAA ACCGTCTCGC CGCCTCGGCG ATGCCAAACC GGCAGGCGAA
CAACAACGTC GCCGCCGTCC GCGTAAACCT GCCGCTGCGC AGTAA
|
|---|
| Protein sequence | MSFDSLGLSP DILRAVAEQG YREPTPIQQQ AIPAVLEGRD LMASAQTGTG KTAGFTLPLL
QHLITRQPHA KGRRPVRALI LTPTRELAAQ IGENVRDYSK YLNIRSLVVF GGVSINPQMM
KLRGGVDVLV ATPGRLLDLE HQNAVKLDQV EILVLDEADR MLDMGFIHDI RRVLTKLPAK
RQNLLFSATF SDDIKALAEK LLHNPLEIEV ARRNTASDQV TQHVHFVDKK RKRELLSHMI
GKGNWQQVLV FTRTKHGANH LAEQLNKDGI RSAAIHGNKS QGARTRALAD FKSGDIRVLV
ATDIAARGLD IEELPHVVNY ELPNVPEDYV HRIGRTGRAA ATGEALSLVC VDEHKLLRDI
EKLLKKEIPR IAIPGYEPDP SIKAEPIQNG RQQRGGGGRG QGGGRGQQQP RRGEGGAKSA
SAKPAEKPSR RLGDAKPAGE QQRRRRPRKP AAAQ
|
|---|
| |