Gene EcolC_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2833 
SymbolglnP 
ID6065108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3099281 
End bp3099940 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content53% 
IMG OID641602239 
Productglutamine ABC transporter permease protein 
Protein accessionYP_001725788 
Protein GI170020834 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.2982 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTTG ACTGGAGTGC CATCTGGCCT GCCATTCCGC TTCTGATTGA AGGTGCCAAA 
ATGACCCTGT GGATTTCGGT CCTCGGTCTG GCAGGCGGTC TGGTAATCGG ATTGCTGGCA
GGTTTTGCAC GCACCTTCGG AGGTTGGATA GCCAACCACG TCGCGCTGGT CTTTATTGAA
GTGATCCGCG GCACACCTAT CGTCGTCCAG GTGATGTTTA TTTATTTCGC CCTGCCGATG
GCGTTTAACG ACTTACGCAT CGACCCATTT ACTGCGGCGG TGGTCACCAT CATGATCAAC
TCCGGCGCGT ATATTGCGGA AATCACGCGT GGTGCGGTGC TGTCTATCCA CAAAGGTTTT
CGTGAAGCAG GACTGGCGCT CGGTCTTTCA CGTTGGGAAA CCATTCGCTA CGTCATTTTA
CCGCTGGCAC TGCGTCGTAT GCTGCCGCCG CTGGGTAACC AGTGGATCAT CAGCATTAAA
GACACCTCGC TGTTTATTGT GATCGGCGTG GCGGAACTGA CCCGTCAGGG GCAAGAAATT
ATTGCCGGTA ACTTCCGCGC CCTTGAGATC TGGAGCGCCG TGGCGGTGTT CTATCTGATT
ATTACCCTGG TGCTGAGCTT TATTCTGCGT CGTCTGGAAA GAAGGATGAA AATCCTGTGA
 
Protein sequence
MQFDWSAIWP AIPLLIEGAK MTLWISVLGL AGGLVIGLLA GFARTFGGWI ANHVALVFIE 
VIRGTPIVVQ VMFIYFALPM AFNDLRIDPF TAAVVTIMIN SGAYIAEITR GAVLSIHKGF
REAGLALGLS RWETIRYVIL PLALRRMLPP LGNQWIISIK DTSLFIVIGV AELTRQGQEI
IAGNFRALEI WSAVAVFYLI ITLVLSFILR RLERRMKIL