Gene EcolC_2617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2617 
Symbol 
ID6067059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2868705 
End bp2869841 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content53% 
IMG OID641602024 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001725575 
Protein GI170020621 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.75974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0214955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT ATGAAACATT GCGCTTCATC TGGTGGCTGC TGATTGGCGT GATCCTGGTG 
GTCTTTATGA TCTCCGACGG ATTTGACATG GGGATCGGCT GTCTGCTGCC GCTGGTGGCG
CGTAATGATG ATGAACGCCG GATAGTGATA AACAGCGTTG GTGCACACTG GGAAGGCAAC
CAGGTCTGGT TGATCCTCGC TGGTGGGGCA TTATTTGCCG CCTGGCCCAG AGTGTATGCA
GCGGCGTTTT CCGGCTTTTA TGTGGCGATG ATCCTGGTGC TGTGCTCACT GTTCTTCCGC
CCGCTGGCCT TTGATTATCG CGGAAAAATC GCCGATGCAC GCTGGCGTAA AATGTGGGAC
GCCGGTCTGG TCATCGGCAG TCTGGTGCCG CCGGTAGTCT TCGGTATCGC CTTCGGCAAC
TTGTTGCTCG GCGTGCCGTT TGCCTTCACA CCGCAATTAC GCGTGGAGTA TCTCGGCAGC
TTCTGGCAAC TGCTGACGCC ATTCCCTTTA TTGTGCGGAT TGCTCAGCCT TGGGATGGTG
ATTTTGCAAG GTGGCGTCTG GTTACAACTG AAAACTGTTG GTGTGATTCA TCTGCGTTCA
CAGCTGGCCA CCAAACGCGC TGCACTGTTG GTGATGCTGT GCTTTTTGCT GGCGGGTTAC
TGGCTGTGGG TCGGTATTGA TGGCTTTGTA CTGCTCGCCC AGGATGCTAA CGGTCCTTCC
AATCCGTTAA TGAAACTGGT GGCAGTGCTA CCTGGTGCCT GGATGAATAA TTTCGTCGAA
TCGCCCGTTT TGTGGATCTT CCCGCTGCTG GGGTTCTTCT GCCCATTGCT GACGGTGATG
GCGATTTATC GTGGTCGCCC GGGTTGGGGA TTTTTAATGG CGTCATTGAT GCAATTTGGC
GTGATTTTCA CGGCAGGCAT CACGCTGTTC CCCTTTGTCA TGCCGTCAAG CGTGAGTCCA
ATCTCCAGCC TGACGTTGTG GGACAGCACT TCCAGTCAGC TGACGCTGAG CATTATGTTG
GTAATCGTGC TGATATTTTT GCCCATTGTG TTGCTCTACA CTCTCTGGAG CTACTACAAA
ATGTGGGGAC GCATGACAAC AGAAACTCTC CGCCGTAACG AAAACGAGTT GTACTAA
 
Protein sequence
MFDYETLRFI WWLLIGVILV VFMISDGFDM GIGCLLPLVA RNDDERRIVI NSVGAHWEGN 
QVWLILAGGA LFAAWPRVYA AAFSGFYVAM ILVLCSLFFR PLAFDYRGKI ADARWRKMWD
AGLVIGSLVP PVVFGIAFGN LLLGVPFAFT PQLRVEYLGS FWQLLTPFPL LCGLLSLGMV
ILQGGVWLQL KTVGVIHLRS QLATKRAALL VMLCFLLAGY WLWVGIDGFV LLAQDANGPS
NPLMKLVAVL PGAWMNNFVE SPVLWIFPLL GFFCPLLTVM AIYRGRPGWG FLMASLMQFG
VIFTAGITLF PFVMPSSVSP ISSLTLWDST SSQLTLSIML VIVLIFLPIV LLYTLWSYYK
MWGRMTTETL RRNENELY