Gene EcolC_2546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2546 
Symbol 
ID6066529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2793330 
End bp2794250 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content53% 
IMG OID641601952 
Productlipid A biosynthesis lauroyl acyltransferase 
Protein accessionYP_001725504 
Protein GI170020550 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID[TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.777293 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.356214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATC TACCCAAGTT CTCCACCGCA CTGCTTCATC CGCGTTATTG GTTAACCTGG 
TTGGGTATTG GCGTACTTTG GTTAGTCGTG CAATTGCCCT ACCCGGTTAT CTACCGCCTC
GGTTGTGGAT TAGGAAAACT GGCGTTACGT TTTATGAAAC GACGCGCAAA AATTGTGCAT
CGCAACCTGG AACTGTGCTT CCCGGAAATG AGCGAACAAG AACGCCGTAA AATGGTGGTG
AAGAATTTCG AATCCGTTGG CATGGGCCTG ATGGAAACCG GCATGGCGTG GTTCTGGCCG
GACCGCCGAA TCGCCCGCTG GACGGAAGTG ATCGGCATGG AACACATTCG TGACGTGCAG
GCGCAAAAAC GCGGCATCCT GTTAGTTGGC ATCCATTTTC TGACACTGGA GCTGGGTGCG
CGGCAGTTTG GTATGCAGGA ACCGGGGATT GGCGTTTACC GCCCGAACGA TAATCCACTG
ATTGACTGGC TACAAACCTG GGGCCGTTTG CGCTCAAATA AATCGATGCT CGACCGCAAA
GATTTAAAAG GCATGATTAA AGCCCTGAAA AAAGGCGAAG TGGTCTGGTA CGCACCGGAT
CATGATTACG GCCCGCGCTC AAGCGTTTTC GTCCCGTTGT TTGCCGTTGA GCAGGCTGCG
ACCACGACCG GAACCTGGAT GCTGGCACGG ATGTCCGGCG CATGTCTGGT GCCCTTCGTT
CCACGCCGTA AGCCAGATGG CAAAGGGTAT CAATTGATTA TGCTGCCGCC AGAGTGTTCT
CCGCCACTGG ATGATGCCGA AACTACCGCC GCGTGGATGA ACAAAGTGGT CGAAAAATGC
ATCATGATGG CACCAGAGCA GTATATGTGG TTACACCGTC GCTTTAAAAC ACGCCCGGAA
GGCGTTCCTT CACGCTATTA A
 
Protein sequence
MTNLPKFSTA LLHPRYWLTW LGIGVLWLVV QLPYPVIYRL GCGLGKLALR FMKRRAKIVH 
RNLELCFPEM SEQERRKMVV KNFESVGMGL METGMAWFWP DRRIARWTEV IGMEHIRDVQ
AQKRGILLVG IHFLTLELGA RQFGMQEPGI GVYRPNDNPL IDWLQTWGRL RSNKSMLDRK
DLKGMIKALK KGEVVWYAPD HDYGPRSSVF VPLFAVEQAA TTTGTWMLAR MSGACLVPFV
PRRKPDGKGY QLIMLPPECS PPLDDAETTA AWMNKVVEKC IMMAPEQYMW LHRRFKTRPE
GVPSRY