| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2503 |
|---|
| Symbol | tmk |
|---|
| ID | 6066038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2754142 |
|---|
| End bp | 2754783 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641601909 |
|---|
| Product | thymidylate kinase |
|---|
| Protein accession | YP_001725461 |
|---|
| Protein GI | 170020507 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0125] Thymidylate kinase |
|---|
| TIGRFAM ID | [TIGR00041] thymidylate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00403809 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000113108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGTA AGTATATCGT CATTGAGGGG CTGGAAGGCG CAGGCAAAAC TACCGCGCGT
AATGTGGTGG TTGAGACGCT CGAGCAACTG GGTATCCGCG ACATGGTTTT CACTCGGGAA
CCTGGCGGTA CGCAACTTGC CGAAAAGTTA AGAAGCCTGG TGCTGGATAT CAAATCGGTA
GGCGATGAAG TCATTACCGA TAAAGCCGAA GTTCTGATGT TTTATGCCGC GCGCGTTCAA
CTGGTAGAAA CAGTCATCAA ACCTGCGCTG GCTAACGGCA CCTGGGTGAT TGGCGATCGC
CACGATCTCT CCACTCAGGC GTATCAGGGC GGCGGACGTG GTATTGACCA ACATATGCTG
GCAACACTGC GTGATGCTGT TCTCGGTGAT TTTCGCCCCG ACTTAACGCT CTATCTCGAT
GTTACCCCGG AAGTTGGCTT AAAACGCGCG CGTGCGCGCG GCGAGCTGGA TCGTATTGAG
CAAGAGTCTT TCGATTTCTT TAATCGCACC CGCGCCCGCT ATCTGGAACT GGCAGCACAA
GATAAAAGCA TTCATACCAT TGATGCCACC CAGCCGCTGG AGGCCGTGAT GGATGCAATC
CGCACTACCG TGACCCACTG GGTGAAGGAG TTGGACGCAT GA
|
|---|
| Protein sequence | MRSKYIVIEG LEGAGKTTAR NVVVETLEQL GIRDMVFTRE PGGTQLAEKL RSLVLDIKSV
GDEVITDKAE VLMFYAARVQ LVETVIKPAL ANGTWVIGDR HDLSTQAYQG GGRGIDQHML
ATLRDAVLGD FRPDLTLYLD VTPEVGLKRA RARGELDRIE QESFDFFNRT RARYLELAAQ
DKSIHTIDAT QPLEAVMDAI RTTVTHWVKE LDA
|
|---|
| |