Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2458 |
Symbol | |
ID | 6067030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2707521 |
End bp | 2709086 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641601864 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001725416 |
Protein GI | 170020462 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.577985 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTTT CATGTATTAA ACCCTTTGGC CGGGACAAGC AAATGCGCAA TACACACATA CCCATCCTCG TTGCGATATG CTTGTTTATT ACCGGTGTCG CTATTTTGAA CATCCAGCTC TGGTATTCCG CAAAAGCAGA GTACCTGGCG GGAGCGAGAT ATGCCGCCAA CAATATCAAT CATATACTTG AAGAAGCGTC ACAAGCGACT CAAACAGCGG TTAACATTGC CGGGAAGGAA TGCAACCTCG AGGAGCAATA TCAGCTTGGC ACTGAAGCAG CTCTGAAACC TCACCTGCGC ACAATCATCA TTCTCAAACA GGGAATAGTC TGGTGTACAT CCCTGCCTGG GAATCGGGTC CTGTTGTCTC GTATTCCTGT TTTCCCGGAC AGTAATTTAC TGTTGGCTCC AGCAATCGAC ACCGTTAATA GATTACCTAT CCTGCTCTAT CAGAACCAAT TTGCAGATAC GCGCATTTTG GTTACGATAA GCGATCAGCA TATTCGTGGG GCACTTAATG TACCCTTGAA AGGGGTAAGG TATGTATTAC GCGTGGCGGA TGACATTATT GGACCAACGG GTGATGTGAT GACGCTTAAT GGACATTATC CCTATACCGA GAAGGTTCAC TCCACAAAAT ATCATTTCAC TATTATCTTT AACCCGCCGC CACTCTTTAG CTTCTACAGA CTTATCGATA AAGGCTTTGG GATTTTAATA TTTATTCTGT TAATCGCCTG CGCCGCTGCC TTCCTGCTTG ATAGATATTT CAATAAAAGC GCAACGCCTG AAGAGATCCT GCGACGGGCA ATAAATAATG GGGAGATCGT CCCTTTTTAC CAACCTGTGG TAAATGGTCG GGAAGGGACA TTGCGGGGAG TTGAGGTGTT AGCCCGCTGG AAACAACCTC ACGGTGGATA TATATCACCC GCGGCATTTA TTCCACTTGC TGAAAAATCC GGATTAATCG TTCCGCTTAC GCAAAGCCTG ATGAATCAGG TTGCCAGACA GATGAACGCT ATCGCGAGTA AATTGCCGGA AGGTTTTCAT ATTGGAATTA ATTTTAGCGC TTCGCATATT ATTTCGCCGA CGTTTGTCGA CGAGTGTTTC AATTTCCGTG ACAGTTTTAC CCGCCGCGAT TTAAACCTTG TTCTGGAAGT CACCGAGCGT GAGCCATTGA ATGTTGATGA AAGTCTGGTT CAGCGGTTGA ACATACTGCA TGAAAATGGT TTTGTCATCG CGCTGGATGA TTTCGGTACT GGCTACTCAG GGCTTTCTTA TCTTCATGAC CTGCATATTG ATTATATCAA AATTGATCAC AGTTTCGTTG GCCGCGTAAA CGCAGACCCA GAATCAACCC GAATTCTGGA TTGTGTATTG GATCTGGCGC GTAAACTTTC GATCAGTATC GTCGCTGAAG GTGTCGAAAC GAAAGAACAA CTTGACTATC TGAACCAAAA TAATATCACA TTTCAGCAGG GTTATTATTT CTATAAACCT GTTACATACA TCGACCTGGT CAAAATTATC CTTTCTAAAC CGAAGGTGAA GGTTGTGGTT GAGTGA
|
Protein sequence | MAFSCIKPFG RDKQMRNTHI PILVAICLFI TGVAILNIQL WYSAKAEYLA GARYAANNIN HILEEASQAT QTAVNIAGKE CNLEEQYQLG TEAALKPHLR TIIILKQGIV WCTSLPGNRV LLSRIPVFPD SNLLLAPAID TVNRLPILLY QNQFADTRIL VTISDQHIRG ALNVPLKGVR YVLRVADDII GPTGDVMTLN GHYPYTEKVH STKYHFTIIF NPPPLFSFYR LIDKGFGILI FILLIACAAA FLLDRYFNKS ATPEEILRRA INNGEIVPFY QPVVNGREGT LRGVEVLARW KQPHGGYISP AAFIPLAEKS GLIVPLTQSL MNQVARQMNA IASKLPEGFH IGINFSASHI ISPTFVDECF NFRDSFTRRD LNLVLEVTER EPLNVDESLV QRLNILHENG FVIALDDFGT GYSGLSYLHD LHIDYIKIDH SFVGRVNADP ESTRILDCVL DLARKLSISI VAEGVETKEQ LDYLNQNNIT FQQGYYFYKP VTYIDLVKII LSKPKVKVVV E
|
| |