Gene EcolC_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2386 
Symbol 
ID6067583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2626183 
End bp2626830 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content48% 
IMG OID641601789 
Producthypothetical protein 
Protein accessionYP_001725348 
Protein GI170020394 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2095] Multiple antibiotic transporter 
TIGRFAM ID[TIGR00427] membrane protein, MarC family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.377039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000152892 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATTCAGA CCTTTTTTGA TTTTCCCGTT TACTTCAAAT TTTTCATCGG GTTATTTGCG 
CTGGTCAACC CGGTAGGGAT TATTCCCGTC TTTATCAGCA TGACCAGTTA TCAGACAGCG
GCAGCGCGAA ACAAAACTAA CCTTACAGCC AACCTGTCTG TGGCCATTAT CTTGTGGATC
TCGCTTTTTC TCGGCGACAC GATTCTGCAA CTTTTTGGTA TATCAATTGA TTCGTTCCGT
ATCGCCGGGG GCATCCTGGT GGTGACGATA GCGATGTCGA TGATCAGCGG CAAGCTTGGC
GAGGATAAAC AGAACAAGCA AGAAAAATCA GAAACCGCGG TACGTGAAAG CATTGGTGTG
GTGCCATTGG CGTTGCCGTT GATGGCGGGG CCAGGGGCGA TCAGTTCTAC CATCGTCTGG
GGTACGCGTT ATCACAGCAT TAGCTATCTG TTTGGTTTCT TTGTGGCTAT TGCATTGTTC
GCTTTATGTT GCTGGGGATT GTTCCGCATG GCACCGTGGC TGGTACGGGT TTTACGCCAG
ACCGGCATCA ACGTGATTAC GCGTATTATG GGGCTATTGC TGATGGCATT GGGGATTGAA
TTTATCGTTA CTGGTATTAA GGGGATTTTC CCCGGCCTGC TTAATTAA
 
Protein sequence
MIQTFFDFPV YFKFFIGLFA LVNPVGIIPV FISMTSYQTA AARNKTNLTA NLSVAIILWI 
SLFLGDTILQ LFGISIDSFR IAGGILVVTI AMSMISGKLG EDKQNKQEKS ETAVRESIGV
VPLALPLMAG PGAISSTIVW GTRYHSISYL FGFFVAIALF ALCCWGLFRM APWLVRVLRQ
TGINVITRIM GLLLMALGIE FIVTGIKGIF PGLLN