Gene EcolC_2307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2307 
Symbol 
ID6068307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2544728 
End bp2545810 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content49% 
IMG OID641601710 
ProductABC transporter related 
Protein accessionYP_001725269 
Protein GI170020315 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.384254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGC TTTCGTTACA ACATATTCAA AAAATCTACG ATAACCAGGT GCATGTGGTG 
AAGGACTTCA ACCTGGAAAT TGCCGATAAA GAGTTCATCG TGTTTGTCGG CCCGTCGGGC
TGCGGTAAGT CGACCACCCT GCGCATGATT GCCGGGCTTG AGGAGATCAG CGGCGGCGAT
CTGTTGATCG ACGGCAAACG AATGAATGAC GTTCCAGCCA AAGCACGCAA TATAGCGATG
GTGTTCCAGA ACTACGCGTT GTATCCGCAT ATGACGGTTT ACGACAACAT GGCGTTTGGT
CTGAAGATGC AAAAAATCGC CAAAGAGGTG ATTGATGAGC GGGTGAACTG GGCGGCGCAA
ATTCTCGGCC TGCGTGAGTA CCTGAAACGT AAGCCGGGGG CGCTTTCCGG CGGGCAACGT
CAGCGAGTGG CGCTTGGGCG GGCGATTGTA CGCGAAGCGG GCGTGTTTTT AATGGATGAA
CCGCTCTCTA ACCTTGATGC CAAGCTGCGC GTGCAAATGC GCGCAGAGAT CAGCAAGCTG
CATCAGAAAC TGAACACCAC CATGATCTAC GTGACCCACG ATCAGACCGA AGCGATGACC
ATGGCGACGC GGATTGTGAT TATGAAAGAC GGGATTGTTC AGCAAGTAGG TGCGCCGAAA
ACCGTTTATA ACCAACCCGC GAATATGTTT GTTTCCGGAT TTATTGGATC ACCAGCGATG
AATTTTATTC GCGGCACGAT CGATGGCGAT AAATTCGTTA CGGAAACGCT TAAATTAACC
ATTCCCGAAG AGAAATTAGC GGTTCTGAAA ACACAGGAAA GTTTGCATAA GCCCATCGTG
ATGGGAATAC GACCGGAAGA TATTCATCCG GACGCGCAAG AGGAAAATAA CATTTCCGCC
AAAATTAGCG TGGCAGAATT AACCGGTGCG GAATTTATGC TCTACACCAC GGTTGGGGGG
CACGAGTTAG TGGTCCGTGC TGGTGCGTTA AATGATTATC ATGCAGGAGA AAATATCACT
ATTCATTTTG ATATGACGAA ATGTCATTTC TTTGATGCAG AAACGGAAAT AGCAATTCGC
TAA
 
Protein sequence
MAQLSLQHIQ KIYDNQVHVV KDFNLEIADK EFIVFVGPSG CGKSTTLRMI AGLEEISGGD 
LLIDGKRMND VPAKARNIAM VFQNYALYPH MTVYDNMAFG LKMQKIAKEV IDERVNWAAQ
ILGLREYLKR KPGALSGGQR QRVALGRAIV REAGVFLMDE PLSNLDAKLR VQMRAEISKL
HQKLNTTMIY VTHDQTEAMT MATRIVIMKD GIVQQVGAPK TVYNQPANMF VSGFIGSPAM
NFIRGTIDGD KFVTETLKLT IPEEKLAVLK TQESLHKPIV MGIRPEDIHP DAQEENNISA
KISVAELTGA EFMLYTTVGG HELVVRAGAL NDYHAGENIT IHFDMTKCHF FDAETEIAIR