| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2275 |
|---|
| Symbol | |
|---|
| ID | 6066995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 2508048 |
|---|
| End bp | 2509037 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641601679 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001725238 |
|---|
| Protein GI | 170020284 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CCGTTTATAG CACAAAACAG TACGACAAGA AGTACCTGCA ACAGGTGAAC
GAGTCCTTTG GCTTTGAGCT GGAATTTTTT GACTTTCTGC TGACGGAAAA AACCGCTAAA
ACTGCCAATG GCTGCGAAGC GGTATGTATT TTCGTAAACG ATGACGGCAG CCGCCCGGTG
CTGGAAGAGC TGAAAAAGCA CGGCGTTAAA TATATCGCCC TGCGCTGTGC CGGTTTCAAT
AACGTCGACC TTGACGCGGC AAAAGAACTG GGGCTGAAAG TAGTCCGTGT TCCAGCCTAT
GATCCAGAGG CCGTTGCTGA ACACGCCATC GGTATGATGA TGACGCTGAA CCGCCGTATT
CACCGCGCGT ATCAGCGTAC CCGTGACGCT AACTTCTCTC TGGAAGGTCT GACCGGCTTT
ACTATGTATG GCAAAACGGC AGGCGTTATC GGTACCGGTA AAATCGGTGT GGCGATGCTG
CGCATTCTGA AAGGTTTTGG TATGCGTCTG CTGGCGTTCG ATCCGTATCC AAGTGCAGCG
GCGCTGGAAC TCGGTGTGGA GTATGTCGAT CTGCCAACCC TGTTCTCTGA ATCAGACGTT
ATCTCTCTGC ACTGCCCGCT GACACCGGAA AACTACCATC TGTTGAACGA AGCCGCCTTC
GATCAGATGA AAAATGGCGT GATGATCGTC AATACCAGTC GCGGTGCATT GATTGATTCT
CAGGCAGCAA TTGAAGCGCT GAAAAATCAG AAAATTGGTT CGTTGGGTAT GGACGTGTAT
GAGAACGAAC GCGATCTGTT CTTTGAAGAT AAATCCAACG ACGTGATCCA GGATGACGTA
TTCCGTCGCC TGTCTGCCTG CCACAACGTG CTGTTTACCG GGCACCAGGC ATTCCTGACA
GCAGAAGCTC TGACCAGTAT TTCTCAGACT ACGCTGCAAA ACTTAAGCAA TCTGGAAAAA
GGCGAAACCT GCCCGAACGA ACTGGTTTAA
|
|---|
| Protein sequence | MKLAVYSTKQ YDKKYLQQVN ESFGFELEFF DFLLTEKTAK TANGCEAVCI FVNDDGSRPV
LEELKKHGVK YIALRCAGFN NVDLDAAKEL GLKVVRVPAY DPEAVAEHAI GMMMTLNRRI
HRAYQRTRDA NFSLEGLTGF TMYGKTAGVI GTGKIGVAML RILKGFGMRL LAFDPYPSAA
ALELGVEYVD LPTLFSESDV ISLHCPLTPE NYHLLNEAAF DQMKNGVMIV NTSRGALIDS
QAAIEALKNQ KIGSLGMDVY ENERDLFFED KSNDVIQDDV FRRLSACHNV LFTGHQAFLT
AEALTSISQT TLQNLSNLEK GETCPNELV
|
|---|
| |