Gene EcolC_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2218 
Symbol 
ID6065331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2437511 
End bp2438524 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content55% 
IMG OID641601624 
ProductABC transporter related 
Protein accessionYP_001725183 
Protein GI170020229 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.905412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTACG CAGTGGAGTT TGACAACGTC TCGCGGTTGT ACGGTGACGT GCGCGCAGTA 
GATGGCGTCA GTATTGCGAT AAAAGATGGT GAGTTCTTCT CTATGCTGGG GCCGTCCGGC
TCCGGCAAAA CCACCTGCCT GCGCCTGATT GCTGGCTTCG AACAGCTTTC CGGCGGGGCT
ATCTCTATCT TTGGTAAACC CGCCAGCAAT CTGCCACCGT GGGAGCGGGA CGTGAATACT
GTCTTTCAGG ACTACGCGCT ATTTCCGCAT ATGTCGATTC TTGACAATGT CGCCTATGGG
CTGATGGTCA AAGGCGTGAA TAAAAAGCAG CGGCACGCAA TGGCGCAAGA GGCGCTGGAG
AAAGTGGCGT TGGGGTTTGT ACATCAACGT AAACCGTCAC AACTTTCTGG TGGTCAGCGC
CAGCGGGTTG CTATCGCCAG AGCATTGGTG AATGAACCGC GCGTATTGCT GTTGGATGAA
CCGCTCGGCG CACTGGATCT CAAATTGCGT GAGCAGATGC AGCTGGAACT GAAAAAACTG
CAACAGTCTC TCGGTATCAC TTTTATCTTC GTTACCCACG ATCAGGGCGA AGCGTTATCG
ATGTCCGATC GTGTGGCGGT TTTCAATAAT GGACGCATTG AGCAGGTCGA TTCCCCGCGC
GATCTCTATA TGCGCCCGCG CACGCCGTTT GTTGCCGGAT TCGTCGGGAC ATCCAACGTT
TTTGATCCGC TAATGGCCGA GAATCTTTGC GGCATGACGG GAAGCTTCGC CCTGCGACCG
GAACATATCC GTCTCAATAT CCCCGGCGAA ATGCAGGCTA ATGGCACGAT CCAGGCGGTG
CAATATCAGG GCGCAGCGAC CCGTTTTGAA CTGACACTGA GCGGCGGTGA AAAACTGCTG
GTGAGTCAGG CCAATATGAC AGGCGAAGAA CTGCCTGCCA CGCTCACGCC CGGACAACAG
GTGATGGTTT CCTGGTCGCG TGATGTGATG GTGCCGCTGG TTGAGGAGAG GTGA
 
Protein sequence
MTYAVEFDNV SRLYGDVRAV DGVSIAIKDG EFFSMLGPSG SGKTTCLRLI AGFEQLSGGA 
ISIFGKPASN LPPWERDVNT VFQDYALFPH MSILDNVAYG LMVKGVNKKQ RHAMAQEALE
KVALGFVHQR KPSQLSGGQR QRVAIARALV NEPRVLLLDE PLGALDLKLR EQMQLELKKL
QQSLGITFIF VTHDQGEALS MSDRVAVFNN GRIEQVDSPR DLYMRPRTPF VAGFVGTSNV
FDPLMAENLC GMTGSFALRP EHIRLNIPGE MQANGTIQAV QYQGAATRFE LTLSGGEKLL
VSQANMTGEE LPATLTPGQQ VMVSWSRDVM VPLVEER