Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_2043 |
Symbol | |
ID | 6067808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 2255997 |
End bp | 2258423 |
Gene Length | 2427 bp |
Protein Length | 808 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641601455 |
Product | anaerobic dimethyl sulfoxide reductase subunit A |
Protein accession | YP_001725014 |
Protein GI | 170020060 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAAA ATGAACGAAT GGTGGGCATC AGCCGCAGAA CACTCGTTAA ATCTACCGCG ATAGGTTCTC TGGCGCTGGC TGCAGGCGGT TTTTCTTTGC CGTTTACCCT GCGCAATGCA GCAGCATCGG TACAACAGGC CCGCGAAAAA GTGGTCTGGG GTGCCTGTTC CGTCAACTGT GGTAGCCGCT GTGCACTTCG TCTACATGTT AAAGATAATG AAGTGACCTG GGTGGAAACT GACAATACCG GCAGCGATGA GTACGGCAAC CATCAGGTAC GCGCCTGTTT GCGCGGTCGC TCCATCCGCC GGCGTATTAA TCATCCCGAT CGCTTGAATT ACCCAATGAA ACGCGTGGGC AAACGCGGCG AAGGCAAATT CGAACGGATT AGCTGGGATG AAGCCCTGGA TACTATCGCC AGTAGCCTGA AGAAAACCGT CGAACAATAT GGCAATGAGG CTGTATATAT TCAGTACTCT TCGGGGATCG TTGGCGGCAA TATGACCCGC TCTTCGCCAT CAGCCTCGGC GGTCAAACGC CTGATGAACT GCTACGGCGG TTCACTCAAC CAGTATGGCT CCTACAGCAC TGCGCAAATT TCCTGTGCCA TGCCCTACAC CTACGGCAGT AATGATGGCA ACAGCACCAC GGATATTGAA AACAGCAAGC TGGTCGTGAT GTTTGGTAAC AACCCGGCAG AAACCCGCAT GAGCGGTGGT GGCATCACTT ATCTTCTTGA AAAAGCGCGC GAGAAATCGA ACGCCAAAAT GATTGTTATC GATCCGCGAT ATACCGATAC GGCTGCCGGT CGTGAAGACG AATGGCTCCC TATTCGCCCG GGCACCGATG CCGCGCTGGT TGCGGGTATT GCCTGGGTAT TGATTAACGA AAATCTCGTT GATCAACCTT TTCTCGATAA ATACTGCGTC GGCTATGACG AAAAAACCTT ACCCGCAGAT GCACCCAAAA ATGGTCACTA TAAAGCCTAT ATTCTTGGTG AAGGTGACGA TAAAACAGCG AAAACGCCGC AGTGGGCTTC GCAAATTACC GGTATCCCGG AGGACCGTAT CATCAAACTG GCGCGTGAAA TTGGCACAGC AAAACCCGCT TATATCTGCC AGGGCTGGGG GCCACAACGC CAGGCAAACG GCGAACTGAC TGCACGCGCT ATTGCTATGT TACCTATTTT GACGGGCAAT GTCGGCATCA GCGGCGGAAA TAGTGGCGCG CGTGAATCGA CCTATACCAT TACCATAGAA CGCCTGCCGG TGCTGGATAA TCCGGTCAAA ACGTCAATCT CCTGCTTCAG CTGGACAGAT GCTATCGATC ATGGTCCGCA AATGACGGCA ATCCGCGACG GCGTCCGCGG CAAAGATAAA CTGGATGTGC CCATTAAGTT CATCTGGAAC TACGCGGGAA ATACCCTCGT TAATCAGCAT TCTGACATCA ACAAAACGCA TGAAATTCTG CAGGACGAAT CGAAATGCGA AATGATTGTG GTCATCGAAA ACTTTATGAC CTCATCGGCA AAATATGCCG ACATTCTGCT GCCAGACCTG ATGACCGTTG AGCAGGAAGA TATTATTCCT AACGACTACG CCGGTAACAT GGGATATCTC ATTTTCCTCC AGCCTGTCAC CAGCGAAAAA TTCGAACGCA AACCGATTTA CTGGATCCTG AGTGAAGTCG CGAAACGTCT TGGACCTGAC GTCTATCAAA AGTTCACAGA AGGTCGCACG CAGGAACAAT GGTTACAACA TCTGTACGCC AAAATGCTTG CCAAAGATCC GGCGTTACCG TCTTACGACG AACTGAAAAA AATGGGTATC TATAAGCGTA AAGATCCCAA TGGCCATTTT GTCGCCTACA AAGCATTTCG TGACGACCCC GAGGCAAATC CACTTAAAAC GCCTTCCGGT AAGATTGAAA TTTATTCCAG CAGGCTGGCG GAAATTGCCC GTACCTGGGA ACTGGAAAAA GATGAAGTGA TAAGCCCATT GCCAGTTTAT GCCTCAACCT TTGAAGGCTG GAACTCCCCT GAACGTAGAA CCTTCCCACT GCAACTGTTT GGTTTCCATT ACAAATCCCG TACTCACTCG ACCTACGGCA ATATTGATCT CCTGAAGGCT GCCTGCCGTC AGGAGGTGTG GATCAACCCT ATAGATGCGC AGAAACGTGG GATTGCCAAC GGCGATATGG TGCGGGTGTT TAACCATCGT GGCGAAGTTC GGCTACCAGC CAAAGTAACA CCACGTATTC TCCCTGGAGT TAGCGCTATG GGCCAGGGAG CCTGGCACGA GGCCAATATG TCTGGCGATA AAATCGACCA TGGCGGCTGT GTGAATACGC TAACCACTCT GCGCCCTTCA CCACTGGCGA AGGGAAACCC GCAGCACACT AATCTGGTCG AGATCGAAAA AATATAA
|
Protein sequence | MSKNERMVGI SRRTLVKSTA IGSLALAAGG FSLPFTLRNA AASVQQAREK VVWGACSVNC GSRCALRLHV KDNEVTWVET DNTGSDEYGN HQVRACLRGR SIRRRINHPD RLNYPMKRVG KRGEGKFERI SWDEALDTIA SSLKKTVEQY GNEAVYIQYS SGIVGGNMTR SSPSASAVKR LMNCYGGSLN QYGSYSTAQI SCAMPYTYGS NDGNSTTDIE NSKLVVMFGN NPAETRMSGG GITYLLEKAR EKSNAKMIVI DPRYTDTAAG REDEWLPIRP GTDAALVAGI AWVLINENLV DQPFLDKYCV GYDEKTLPAD APKNGHYKAY ILGEGDDKTA KTPQWASQIT GIPEDRIIKL AREIGTAKPA YICQGWGPQR QANGELTARA IAMLPILTGN VGISGGNSGA RESTYTITIE RLPVLDNPVK TSISCFSWTD AIDHGPQMTA IRDGVRGKDK LDVPIKFIWN YAGNTLVNQH SDINKTHEIL QDESKCEMIV VIENFMTSSA KYADILLPDL MTVEQEDIIP NDYAGNMGYL IFLQPVTSEK FERKPIYWIL SEVAKRLGPD VYQKFTEGRT QEQWLQHLYA KMLAKDPALP SYDELKKMGI YKRKDPNGHF VAYKAFRDDP EANPLKTPSG KIEIYSSRLA EIARTWELEK DEVISPLPVY ASTFEGWNSP ERRTFPLQLF GFHYKSRTHS TYGNIDLLKA ACRQEVWINP IDAQKRGIAN GDMVRVFNHR GEVRLPAKVT PRILPGVSAM GQGAWHEANM SGDKIDHGGC VNTLTTLRPS PLAKGNPQHT NLVEIEKI
|
| |