Gene EcolC_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2022 
Symbol 
ID6067954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2233614 
End bp2234333 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID641601434 
ProductDNA-binding transcriptional regulator RstA 
Protein accessionYP_001724993 
Protein GI170020039 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTA TCGTATTTGT GGAAGATGAT GCGGAAGTCG GTTCACTGAT TGCCGCGTAC 
CTGGCAAAAC ATGATATGCA GGTTACCGTA GAGCCGCGCG GCGACCAGGC CGAAGAAACC
ATTTTGCGAG AAAATCCGGA TTTGGTGTTA CTCGACATCA TGCTACCAGG CAAGGACGGC
ATGACCATTT GTCGTGATTT ACGCGCAAAG TGGTCTGGAC CGATTGTTCT TCTAACCTCT
CTCGATAGCG ATATGAACCA CATCCTGGCA CTGGAAATGG GTGCCTGCGA CTATATTCTC
AAAACGACGC CCCCTGCTGT TTTGCTAGCG CGTTTACGTT TGCATTTGCG TCAGAATGAG
CAAGCCACAC TGACCAAAGG TCTTCAGGAA ACGTCTCTGA CTCCCTACAA AGCCCTGCAT
TTCGGCACGT TGACCATCGA TCCCATCAAC CGCGTAGTCA CCCTGGCTAA CACTGAAATC
TCGCTCTCGA CAGCTGATTT CGAATTATTG TGGGAATTAG CTACCCATGC CGGGCAAATC
ATGGACCGCG ATGCATTGCT GAAAAATTTA CGCGGCGTCA GTTATGACGG ACTGGATCGT
AGCGTGGACG TGGCTATTTC GCGGTTAAGA AAAAAACTAC TCGATAACGC CGCAGAACCT
TATCGCATTA AAACCGTGCG TAACAAAGGC TATCTTTTTG CGCCTCATGC ATGGGAATAA
 
Protein sequence
MNTIVFVEDD AEVGSLIAAY LAKHDMQVTV EPRGDQAEET ILRENPDLVL LDIMLPGKDG 
MTICRDLRAK WSGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQNE
QATLTKGLQE TSLTPYKALH FGTLTIDPIN RVVTLANTEI SLSTADFELL WELATHAGQI
MDRDALLKNL RGVSYDGLDR SVDVAISRLR KKLLDNAAEP YRIKTVRNKG YLFAPHAWE