Gene EcolC_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2012 
Symbol 
ID6068052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp2219622 
End bp2220212 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID641601425 
ProductTetR family transcriptional regulator 
Protein accessionYP_001724984 
Protein GI170020030 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.952906 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.615913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATA ACATGCAGAC TGAAGCACAA CCGACACGGA CCCGGATCCT CAATGCTGCC 
AGAGAGATTT TTTCAGAAAA TGGATTTCAC AGTGCCTCGA TGAAAGCCAT CTGTAAATCT 
TGCGCCATTA GTCCCGGGAC GCTCTATCAC CATTTCATCT CCAAAGAAGC CTTGATTCAG 
GCGATTATCT TACAGGACCA GGAGAGGGCG CTGGCCCGTT TCCGGGAACC GATTGAAGGG 
ATTCATTTCG TTGACTATAT GGTCGAGTCC ATTGTCTCTC TCACCCATGA AGCCTTTGGA 
CAACGGGCGC TGGTGGTTGA AATTATGGCG GAAGGGATGC GTAACCCACA GGTCGCCGCC 
ATGCTTAAAA ATAAGCATAT GACGATCACG GAATTTGTTG CCCAGCGGAT GCGTGATGCC 
CAGCAAAAAG GCGAGATAAG CCCAGACATC AACACGGCAA TGACTTCACG TTTACTGCTG 
GATCTGACCT ACGGTGTACT GGCCGATATC GAAGCGGAAG ACCTGGCGCG TGAAGCGTCG 
TTTGCTCAGG GATTACGCGC GATGATTGGC GGTATCTTAA CCGCATCCTG A
 
Protein sequence
MMDNMQTEAQ PTRTRILNAA REIFSENGFH SASMKAICKS CAISPGTLYH HFISKEALIQ 
AIILQDQERA LARFREPIEG IHFVDYMVES IVSLTHEAFG QRALVVEIMA EGMRNPQVAA 
MLKNKHMTIT EFVAQRMRDA QQKGEISPDI NTAMTSRLLL DLTYGVLADI EAEDLAREAS 
FAQGLRAMIG GILTAS