Gene EcolC_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1996 
Symbol 
ID6068144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2204517 
End bp2205152 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content49% 
IMG OID641601410 
Productendonuclease III 
Protein accessionYP_001724969 
Protein GI170020015 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0209025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0823674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAG CAAAACGCCT GGAGATCCTC ACTCGCCTGC GTGAGAACAA TCCTCATCCC 
ACCACCGAGC TTAATTTCAG TTCGCCTTTT GAATTGCTGA TTGCCGTACT GCTTTCCGCT
CAGGCGACCG ATGTCAGTGT TAATAAGGCG ACGGCGAAAC TCTACCCGGT GGCGAATACG
CCTGCAGCGA TGCTTGAACT GGGCGTTGAA GGGGTGAAAA CCTATATCAA AACGATTGGG
CTTTATAACA GCAAAGCAGA AAATATCATC AAAACCTGCC GTATCTTGCT GGAGCAGCAT
AATGGCGAGG TTCCGGAAGA TCGTGCTGCG CTTGAAGCCC TGCCCGGCGT AGGTCGTAAA
ACAGCCAACG TCGTATTAAA CACTGCATTC GGCTGGCCGA CTATTGCTGT CGACACGCAC
ATTTTCCGCG TTTGTAATCG TACTCAATTT GCGCCGGGGA AAAACGTCGA ACAGGTAGAA
GAAAAGCTAC TGAAAGTGGT TCCGGCAGAG TTTAAAGTCG ACTGCCACCA TTGGTTGATC
CTGCACGGGC GTTATACCTG CATTGCCCGC AAGCCCCGCT GTGGCTCTTG TATTATTGAA
GATCTTTGTG AATACAAAGA GAAAGTTGAC ATCTGA
 
Protein sequence
MNKAKRLEIL TRLRENNPHP TTELNFSSPF ELLIAVLLSA QATDVSVNKA TAKLYPVANT 
PAAMLELGVE GVKTYIKTIG LYNSKAENII KTCRILLEQH NGEVPEDRAA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRVCNRTQF APGKNVEQVE EKLLKVVPAE FKVDCHHWLI
LHGRYTCIAR KPRCGSCIIE DLCEYKEKVD I