Gene EcolC_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1983 
Symbol 
ID6068179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2192005 
End bp2192541 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content53% 
IMG OID641601397 
Productsuperoxide dismutase 
Protein accessionYP_001724956 
Protein GI170020002 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0141955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00119703 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGGAG GTCCTATGAA ACGTTTTAGT CTGGCTATTC TGGCGCTGGT TGTTGCAACC 
GGCGCACAAG CTGCCAGTGA AAAAGTCGAG ATGAACCTCG TCACGTCGCA AGGGGTAGGG
CAGTCAATTG GTAGCGTCAC CATTACTGAA ACCGATAAAG GTCTGGAGTT TTCGCCCGAT
CTGAAAGCAT TACCCCCCGG TGAACATGGC TTCCATATTC ATGCCAAAGG AAGCTGCCAG
CCAGCCACCA AAGATGGCAA AGCCAGCGCC GCGGAATCCG CAGGCGGGCA TCTTGATCCA
CAAAATACCG GTAAACATGA AGGGCCAGAA GGTGCCGGGC ATTTAGGCGA TCTGCCTGCA
CTGGTCGTCA ATAATGACGG CAAAGCTACC GATGCCGTCA TCGCGCCTCG TCTGAAATCA
CTGGATGAAA TCAAAGACAA AGCGCTGATG GTCCACGTTG GCGGCGATAA TATGTCCGAT
CAACCTAAAC CGCTGGGCGG TGGCGGTGAA CGCTATGCCT GTGGTGTAAT TAAGTAA
 
Protein sequence
MNGGPMKRFS LAILALVVAT GAQAASEKVE MNLVTSQGVG QSIGSVTITE TDKGLEFSPD 
LKALPPGEHG FHIHAKGSCQ PATKDGKASA AESAGGHLDP QNTGKHEGPE GAGHLGDLPA
LVVNNDGKAT DAVIAPRLKS LDEIKDKALM VHVGGDNMSD QPKPLGGGGE RYACGVIK