Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1983 |
Symbol | |
ID | 6068179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2192005 |
End bp | 2192541 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641601397 |
Product | superoxide dismutase |
Protein accession | YP_001724956 |
Protein GI | 170020002 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0141955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00119703 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGGAG GTCCTATGAA ACGTTTTAGT CTGGCTATTC TGGCGCTGGT TGTTGCAACC GGCGCACAAG CTGCCAGTGA AAAAGTCGAG ATGAACCTCG TCACGTCGCA AGGGGTAGGG CAGTCAATTG GTAGCGTCAC CATTACTGAA ACCGATAAAG GTCTGGAGTT TTCGCCCGAT CTGAAAGCAT TACCCCCCGG TGAACATGGC TTCCATATTC ATGCCAAAGG AAGCTGCCAG CCAGCCACCA AAGATGGCAA AGCCAGCGCC GCGGAATCCG CAGGCGGGCA TCTTGATCCA CAAAATACCG GTAAACATGA AGGGCCAGAA GGTGCCGGGC ATTTAGGCGA TCTGCCTGCA CTGGTCGTCA ATAATGACGG CAAAGCTACC GATGCCGTCA TCGCGCCTCG TCTGAAATCA CTGGATGAAA TCAAAGACAA AGCGCTGATG GTCCACGTTG GCGGCGATAA TATGTCCGAT CAACCTAAAC CGCTGGGCGG TGGCGGTGAA CGCTATGCCT GTGGTGTAAT TAAGTAA
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Protein sequence | MNGGPMKRFS LAILALVVAT GAQAASEKVE MNLVTSQGVG QSIGSVTITE TDKGLEFSPD LKALPPGEHG FHIHAKGSCQ PATKDGKASA AESAGGHLDP QNTGKHEGPE GAGHLGDLPA LVVNNDGKAT DAVIAPRLKS LDEIKDKALM VHVGGDNMSD QPKPLGGGGE RYACGVIK
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