Gene EcolC_1973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1973 
Symbol 
ID6068213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2180716 
End bp2181297 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content50% 
IMG OID641601387 
Productsuperoxide dismutase 
Protein accessionYP_001724946 
Protein GI170019992 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0009948 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATTCG AATTACCTGC ACTACCATAT GCTAAAGATG CTCTGGCACC GCACATTTCT 
GCGGAAACCA TCGAGTATCA CTACGGCAAG CACCATCAGA CTTATGTCAC TAACCTGAAC
AACCTGATTA AAGGTACCGC GTTTGAAGGT AAATCACTGG AAGAGATTAT TCGCAGCTCT
GAAGGTGGCG TATTCAACAA CGCAGCTCAG GTCTGGAACC ATACTTTCTA CTGGAACTGC
CTGGCACCGA ACGCCGGTGG CGAACCGACT GGAAAAGTCG CTGAAGCTAT CGCCGCATCT
TTTGGCAGCT TTGCCGATTT CAAAGCGCAG TTTACTGATG CAGCGATCAA AAACTTTGGT
TCTGGCTGGA CCTGGCTGGT GAAAAACAGC GATGGCAAAC TGGCTATCGT TTCAACCTCT
AACGCGGGTA CTCCGCTGAC CACCGATGCG ACTCCGCTGC TGACCGTTGA TGTCTGGGAA
CACGCTTATT ACATCGACTA TCGCAATGCA CGTCCTGGCT ATCTGGAGCA CTTCTGGGCG
CTGGTGAACT GGGAATTCGT AGCGAAAAAT CTCGCTGCAT AA
 
Protein sequence
MSFELPALPY AKDALAPHIS AETIEYHYGK HHQTYVTNLN NLIKGTAFEG KSLEEIIRSS 
EGGVFNNAAQ VWNHTFYWNC LAPNAGGEPT GKVAEAIAAS FGSFADFKAQ FTDAAIKNFG
SGWTWLVKNS DGKLAIVSTS NAGTPLTTDA TPLLTVDVWE HAYYIDYRNA RPGYLEHFWA
LVNWEFVAKN LAA